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Co-Clinical Imaging Metadata Information (CIMI) for Cancer Research to Promote Open Science, Standardization, and Reproducibility in Preclinical Imaging.
Moore SM, Quirk JD, Lassiter AW, Laforest R, Ayers GD, Badea CT, Fedorov AY, Kinahan PE, Holbrook M, Larson PEZ, Sriram R, Chenevert TL, Malyarenko D, Kurhanewicz J, Houghton AM, Ross BD, Pickup S, Gee JC, Zhou R, Gammon ST, Manning HC, Roudi R, Daldrup-Link HE, Lewis MT, Rubin DL, Yankeelov TE, Shoghi KI. Moore SM, et al. Among authors: gee jc. Tomography. 2023 May 11;9(3):995-1009. doi: 10.3390/tomography9030081. Tomography. 2023. PMID: 37218941 Free PMC article.
Merged magnetic resonance and light sheet microscopy of the whole mouse brain.
Johnson GA, Tian Y, Ashbrook DG, Cofer GP, Cook JJ, Gee JC, Hall A, Hornburg K, Kaczorowski CC, Qi Y, Yeh FC, Wang N, White LE, Williams RW. Johnson GA, et al. Among authors: gee jc. Proc Natl Acad Sci U S A. 2023 Apr 25;120(17):e2218617120. doi: 10.1073/pnas.2218617120. Epub 2023 Apr 17. Proc Natl Acad Sci U S A. 2023. PMID: 37068254 Free PMC article.
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain.
Yao Z, van Velthoven CTJ, Kunst M, Zhang M, McMillen D, Lee C, Jung W, Goldy J, Abdelhak A, Baker P, Barkan E, Bertagnolli D, Campos J, Carey D, Casper T, Chakka AB, Chakrabarty R, Chavan S, Chen M, Clark M, Close J, Crichton K, Daniel S, Dolbeare T, Ellingwood L, Gee J, Glandon A, Gloe J, Gould J, Gray J, Guilford N, Guzman J, Hirschstein D, Ho W, Jin K, Kroll M, Lathia K, Leon A, Long B, Maltzer Z, Martin N, McCue R, Meyerdierks E, Nguyen TN, Pham T, Rimorin C, Ruiz A, Shapovalova N, Slaughterbeck C, Sulc J, Tieu M, Torkelson A, Tung H, Cuevas NV, Wadhwani K, Ward K, Levi B, Farrell C, Thompson CL, Mufti S, Pagan CM, Kruse L, Dee N, Sunkin SM, Esposito L, Hawrylycz MJ, Waters J, Ng L, Smith KA, Tasic B, Zhuang X, Zeng H. Yao Z, et al. bioRxiv [Preprint]. 2023 Mar 6:2023.03.06.531121. doi: 10.1101/2023.03.06.531121. bioRxiv. 2023. PMID: 37034735 Free PMC article. Updated. Preprint.
Tau maturation in the clinicopathological spectrum of Lewy body and Alzheimer's disease.
Arezoumandan S, Cousins KAQ, Ohm DT, Lowe M, Chen M, Gee J, Phillips JS, McMillan CT, Luk KC, Deik A, Spindler MA, Tropea TF, Weintraub D, Wolk DA, Grossman M, Lee V, Chen-Plotkin AS, Lee EB, Irwin DJ. Arezoumandan S, et al. Ann Clin Transl Neurol. 2024 Mar;11(3):673-685. doi: 10.1002/acn3.51988. Epub 2024 Jan 23. Ann Clin Transl Neurol. 2024. PMID: 38263854 Free PMC article.
Developmental Mouse Brain Common Coordinate Framework.
Kronman FA, Liwang JK, Betty R, Vanselow DJ, Wu YT, Tustison NJ, Bhandiwad A, Manjila SB, Minteer JA, Shin D, Lee CH, Patil R, Duda JT, Puelles L, Gee JC, Zhang J, Ng L, Kim Y. Kronman FA, et al. Among authors: gee jc. bioRxiv [Preprint]. 2023 Sep 15:2023.09.14.557789. doi: 10.1101/2023.09.14.557789. bioRxiv. 2023. PMID: 37745386 Free PMC article. Preprint.
ANTsX neuroimaging-derived structural phenotypes of UK Biobank.
Tustison NJ, Yassa MA, Rizvi B, Cook PA, Holbrook AJ, Sathishkumar MT, Tustison MG, Gee JC, Stone JR, Avants BB. Tustison NJ, et al. Among authors: gee jc. Sci Rep. 2024 Apr 17;14(1):8848. doi: 10.1038/s41598-024-59440-6. Sci Rep. 2024. PMID: 38632390 Free PMC article.
Clinical correlates of CT imaging-derived phenotypes among lean and overweight patients with hepatic steatosis.
Song I, Thompson EW, Verma A, MacLean MT, Duda J, Elahi A, Tran R, Raghupathy P, Swago S, Hazim M, Bhattaru A, Schneider C, Vujkovic M, Torigian DA, Kahn CE, Gee JC, Borthakur A, Kripke CM, Carson CC, Carr R, Jehangir Q, Ko YA, Litt H, Rosen M, Mankoff DA, Schnall MD, Shou H, Chirinos J, Damrauer SM, Serper M, Chen J, Rader DJ; Penn Medicine BioBank; Witschey WRT, Sagreiya H. Song I, et al. Among authors: gee jc. Sci Rep. 2024 Jan 2;14(1):53. doi: 10.1038/s41598-023-49470-x. Sci Rep. 2024. PMID: 38167550 Free PMC article.
192 results