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A case study evaluating the portability of an executable computable phenotype algorithm across multiple institutions and electronic health record environments.
Pacheco JA, Rasmussen LV, Kiefer RC, Campion TR, Speltz P, Carroll RJ, Stallings SC, Mo H, Ahuja M, Jiang G, LaRose ER, Peissig PL, Shang N, Benoit B, Gainer VS, Borthwick K, Jackson KL, Sharma A, Wu AY, Kho AN, Roden DM, Pathak J, Denny JC, Thompson WK. Pacheco JA, et al. Among authors: gainer vs. J Am Med Inform Assoc. 2018 Nov 1;25(11):1540-1546. doi: 10.1093/jamia/ocy101. J Am Med Inform Assoc. 2018. PMID: 30124903 Free PMC article.
Seasonality shows evidence for polygenic architecture and genetic correlation with schizophrenia and bipolar disorder.
Byrne EM; Psychiatric Genetics Consortium Major Depressive Disorder Working Group; Raheja UK, Stephens SH, Heath AC, Madden PA, Vaswani D, Nijjar GV, Ryan KA, Youssufi H, Gehrman PR, Shuldiner AR, Martin NG, Montgomery GW, Wray NR, Nelson EC, Mitchell BD, Postolache TT. Byrne EM, et al. J Clin Psychiatry. 2015 Feb;76(2):128-34. doi: 10.4088/JCP.14m08981. J Clin Psychiatry. 2015. PMID: 25562672 Free PMC article.
Portability of an algorithm to identify rheumatoid arthritis in electronic health records.
Carroll RJ, Thompson WK, Eyler AE, Mandelin AM, Cai T, Zink RM, Pacheco JA, Boomershine CS, Lasko TA, Xu H, Karlson EW, Perez RG, Gainer VS, Murphy SN, Ruderman EM, Pope RM, Plenge RM, Kho AN, Liao KP, Denny JC. Carroll RJ, et al. Among authors: gainer vs. J Am Med Inform Assoc. 2012 Jun;19(e1):e162-9. doi: 10.1136/amiajnl-2011-000583. Epub 2012 Feb 28. J Am Med Inform Assoc. 2012. PMID: 22374935 Free PMC article.
Validation of electronic health record phenotyping of bipolar disorder cases and controls.
Castro VM, Minnier J, Murphy SN, Kohane I, Churchill SE, Gainer V, Cai T, Hoffnagle AG, Dai Y, Block S, Weill SR, Nadal-Vicens M, Pollastri AR, Rosenquist JN, Goryachev S, Ongur D, Sklar P, Perlis RH, Smoller JW; International Cohort Collection for Bipolar Disorder Consortium. Castro VM, et al. Am J Psychiatry. 2015 Apr;172(4):363-72. doi: 10.1176/appi.ajp.2014.14030423. Epub 2014 Dec 12. Am J Psychiatry. 2015. PMID: 25827034 Free PMC article.
Methods to Develop an Electronic Medical Record Phenotype Algorithm to Compare the Risk of Coronary Artery Disease across 3 Chronic Disease Cohorts.
Liao KP, Ananthakrishnan AN, Kumar V, Xia Z, Cagan A, Gainer VS, Goryachev S, Chen P, Savova GK, Agniel D, Churchill S, Lee J, Murphy SN, Plenge RM, Szolovits P, Kohane I, Shaw SY, Karlson EW, Cai T. Liao KP, et al. Among authors: gainer vs. PLoS One. 2015 Aug 24;10(8):e0136651. doi: 10.1371/journal.pone.0136651. eCollection 2015. PLoS One. 2015. PMID: 26301417 Free PMC article.
Surrogate-assisted feature extraction for high-throughput phenotyping.
Yu S, Chakrabortty A, Liao KP, Cai T, Ananthakrishnan AN, Gainer VS, Churchill SE, Szolovits P, Murphy SN, Kohane IS, Cai T. Yu S, et al. Among authors: gainer vs. J Am Med Inform Assoc. 2017 Apr 1;24(e1):e143-e149. doi: 10.1093/jamia/ocw135. J Am Med Inform Assoc. 2017. PMID: 27632993 Free PMC article.
Enabling phenotypic big data with PheNorm.
Yu S, Ma Y, Gronsbell J, Cai T, Ananthakrishnan AN, Gainer VS, Churchill SE, Szolovits P, Murphy SN, Kohane IS, Liao KP, Cai T. Yu S, et al. Among authors: gainer vs. J Am Med Inform Assoc. 2018 Jan 1;25(1):54-60. doi: 10.1093/jamia/ocx111. J Am Med Inform Assoc. 2018. PMID: 29126253 Free PMC article.
104 results