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A pre-registered short-term forecasting study of COVID-19 in Germany and Poland during the second wave.
Bracher J, Wolffram D, Deuschel J, Görgen K, Ketterer JL, Ullrich A, Abbott S, Barbarossa MV, Bertsimas D, Bhatia S, Bodych M, Bosse NI, Burgard JP, Castro L, Fairchild G, Fuhrmann J, Funk S, Gogolewski K, Gu Q, Heyder S, Hotz T, Kheifetz Y, Kirsten H, Krueger T, Krymova E, Li ML, Meinke JH, Michaud IJ, Niedzielewski K, Ożański T, Rakowski F, Scholz M, Soni S, Srivastava A, Zieliński J, Zou D, Gneiting T, Schienle M; List of Contributors by Team. Bracher J, et al. Among authors: funk s. Nat Commun. 2021 Aug 27;12(1):5173. doi: 10.1038/s41467-021-25207-0. Nat Commun. 2021. PMID: 34453047 Free PMC article.
The effect of control strategies to reduce social mixing on outcomes of the COVID-19 epidemic in Wuhan, China: a modelling study.
Prem K, Liu Y, Russell TW, Kucharski AJ, Eggo RM, Davies N; Centre for the Mathematical Modelling of Infectious Diseases COVID-19 Working Group; Jit M, Klepac P. Prem K, et al. Lancet Public Health. 2020 May;5(5):e261-e270. doi: 10.1016/S2468-2667(20)30073-6. Epub 2020 Mar 25. Lancet Public Health. 2020. PMID: 32220655 Free PMC article.
Inferring the number of COVID-19 cases from recently reported deaths.
Jombart T, van Zandvoort K, Russell TW, Jarvis CI, Gimma A, Abbott S, Clifford S, Funk S, Gibbs H, Liu Y, Pearson CAB, Bosse NI; Centre for the Mathematical Modelling of Infectious Diseases COVID-19 Working Group; Eggo RM, Kucharski AJ, Edmunds WJ. Jombart T, et al. Among authors: funk s. Wellcome Open Res. 2020 Apr 27;5:78. doi: 10.12688/wellcomeopenres.15786.1. eCollection 2020. Wellcome Open Res. 2020. PMID: 32518842 Free PMC article.
Practical considerations for measuring the effective reproductive number, Rt.
Gostic KM, McGough L, Baskerville EB, Abbott S, Joshi K, Tedijanto C, Kahn R, Niehus R, Hay JA, De Salazar PM, Hellewell J, Meakin S, Munday JD, Bosse NI, Sherrat K, Thompson RN, White LF, Huisman JS, Scire J, Bonhoeffer S, Stadler T, Wallinga J, Funk S, Lipsitch M, Cobey S. Gostic KM, et al. Among authors: funk s. PLoS Comput Biol. 2020 Dec 10;16(12):e1008409. doi: 10.1371/journal.pcbi.1008409. eCollection 2020 Dec. PLoS Comput Biol. 2020. PMID: 33301457 Free PMC article.
Implications of the school-household network structure on SARS-CoV-2 transmission under school reopening strategies in England.
Munday JD, Sherratt K, Meakin S, Endo A, Pearson CAB, Hellewell J, Abbott S, Bosse NI; CMMID COVID-19 Working Group; Atkins KE, Wallinga J, Edmunds WJ, van Hoek AJ, Funk S. Munday JD, et al. Among authors: funk s. Nat Commun. 2021 Mar 29;12(1):1942. doi: 10.1038/s41467-021-22213-0. Nat Commun. 2021. PMID: 33782396 Free PMC article.
Genomic reconstruction of the SARS-CoV-2 epidemic in England.
Vöhringer HS, Sanderson T, Sinnott M, De Maio N, Nguyen T, Goater R, Schwach F, Harrison I, Hellewell J, Ariani CV, Gonçalves S, Jackson DK, Johnston I, Jung AW, Saint C, Sillitoe J, Suciu M, Goldman N, Panovska-Griffiths J; Wellcome Sanger Institute COVID-19 Surveillance Team; COVID-19 Genomics UK (COG-UK) Consortium*; Birney E, Volz E, Funk S, Kwiatkowski D, Chand M, Martincorena I, Barrett JC, Gerstung M. Vöhringer HS, et al. Among authors: funk s. Nature. 2021 Dec;600(7889):506-511. doi: 10.1038/s41586-021-04069-y. Epub 2021 Oct 14. Nature. 2021. PMID: 34649268 Free PMC article.
525 results