Friedel CC - Search Results

1

Women in the European Virus Bioinformatics Center.

Hufsky F, Abecasis A, Agudelo-Romero P, Bletsa M, Brown K, Claus C, Deinhardt-Emmer S, Deng L, Friedel CC, Gismondi MI, Kostaki EG, Kühnert D, Kulkarni-Kale U, Metzner KJ, Meyer IM, Miozzi L, Nishimura L, Paraskevopoulou S, Pérez-Cataluña A, Rahlff J, Thomson E, Tumescheit C, van der Hoek L, Van Espen L, Vandamme AM, Zaheri M, Zuckerman N, Marz M. Hufsky F, et al. Among authors: friedel cc. Viruses. 2022 Jul 12;14(7):1522. doi: 10.3390/v14071522. Viruses. 2022. PMID: 35891501 Free PMC article.

2

Computational analysis of virus-host interactomes.

Friedel CC. Friedel CC. Methods Mol Biol. 2013;1064:115-30. doi: 10.1007/978-1-62703-601-6_8. Methods Mol Biol. 2013. PMID: 23996253 Free PMC article.

3

Integrative functional genomics decodes herpes simplex virus 1.

Whisnant AW, Jürges CS, Hennig T, Wyler E, Prusty B, Rutkowski AJ, L'hernault A, Djakovic L, Göbel M, Döring K, Menegatti J, Antrobus R, Matheson NJ, Künzig FWH, Mastrobuoni G, Bielow C, Kempa S, Liang C, Dandekar T, Zimmer R, Landthaler M, Grässer F, Lehner PJ, Friedel CC, Erhard F, Dölken L. Whisnant AW, et al. Among authors: friedel cc. Nat Commun. 2020 Apr 27;11(1):2038. doi: 10.1038/s41467-020-15992-5. Nat Commun. 2020. PMID: 32341360 Free PMC article.

4

Watchdog 2.0: New developments for reusability, reproducibility, and workflow execution.

Kluge M, Friedl MS, Menzel AL, Friedel CC. Kluge M, et al. Among authors: friedel cc. Gigascience. 2020 Jun 1;9(6):giaa068. doi: 10.1093/gigascience/giaa068. Gigascience. 2020. PMID: 32556167 Free PMC article.

5

Identifying the topology of protein complexes from affinity purification assays.

Friedel CC, Zimmer R. Friedel CC, et al. Bioinformatics. 2009 Aug 15;25(16):2140-6. doi: 10.1093/bioinformatics/btp353. Epub 2009 Jun 8. Bioinformatics. 2009. PMID: 19505940 Free PMC article.

6

Bootstrapping the interactome: unsupervised identification of protein complexes in yeast.

Friedel CC, Krumsiek J, Zimmer R. Friedel CC, et al. J Comput Biol. 2009 Aug;16(8):971-87. doi: 10.1089/cmb.2009.0023. J Comput Biol. 2009. PMID: 19630542

7

Virus-host interactomes and global models of virus-infected cells.

Friedel CC, Haas J. Friedel CC, et al. Trends Microbiol. 2011 Oct;19(10):501-8. doi: 10.1016/j.tim.2011.07.003. Epub 2011 Aug 18. Trends Microbiol. 2011. PMID: 21855347 Review.

8

Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection.

Wyler E, Menegatti J, Franke V, Kocks C, Boltengagen A, Hennig T, Theil K, Rutkowski A, Ferrai C, Baer L, Kermas L, Friedel C, Rajewsky N, Akalin A, Dölken L, Grässer F, Landthaler M. Wyler E, et al. Genome Biol. 2017 Oct 31;18(1):209. doi: 10.1186/s13059-017-1329-5. Genome Biol. 2017. PMID: 29089033 Free PMC article.

9

Watchdog - a workflow management system for the distributed analysis of large-scale experimental data.

Kluge M, Friedel CC. Kluge M, et al. Among authors: friedel cc. BMC Bioinformatics. 2018 Mar 13;19(1):97. doi: 10.1186/s12859-018-2107-4. BMC Bioinformatics. 2018. PMID: 29534677 Free PMC article.

10

Mechanism and consequences of herpes simplex virus 1-mediated regulation of host mRNA alternative polyadenylation.

Wang X, Liu L, Whisnant AW, Hennig T, Djakovic L, Haque N, Bach C, Sandri-Goldin RM, Erhard F, Friedel CC, Dölken L, Shi Y. Wang X, et al. Among authors: friedel cc. PLoS Genet. 2021 Mar 8;17(3):e1009263. doi: 10.1371/journal.pgen.1009263. eCollection 2021 Mar. PLoS Genet. 2021. PMID: 33684133 Free PMC article.

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