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Page 1
Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimaging.
Renton AI, Dao TT, Johnstone T, Civier O, Sullivan RP, White DJ, Lyons P, Slade BM, Abbott DF, Amos TJ, Bollmann S, Botting A, Campbell MEJ, Chang J, Close TG, Dörig M, Eckstein K, Egan GF, Evas S, Flandin G, Garner KG, Garrido MI, Ghosh SS, Grignard M, Halchenko YO, Hannan AJ, Heinsfeld AS, Huber L, Hughes ME, Kaczmarzyk JR, Kasper L, Kuhlmann L, Lou K, Mantilla-Ramos YJ, Mattingley JB, Meier ML, Morris J, Narayanan A, Pestilli F, Puce A, Ribeiro FL, Rogasch NC, Rorden C, Schira MM, Shaw TB, Sowman PF, Spitz G, Stewart AW, Ye X, Zhu JD, Narayanan A, Bollmann S. Renton AI, et al. Among authors: flandin g. Nat Methods. 2024 May;21(5):804-808. doi: 10.1038/s41592-023-02145-x. Epub 2024 Jan 8. Nat Methods. 2024. PMID: 38191935
The Past, Present, and Future of the Brain Imaging Data Structure (BIDS).
Poldrack RA, Markiewicz CJ, Appelhoff S, Ashar YK, Auer T, Baillet S, Bansal S, Beltrachini L, Benar CG, Bertazzoli G, Bhogawar S, Blair RW, Bortoletto M, Boudreau M, Brooks TL, Calhoun VD, Castelli FM, Clement P, Cohen AL, Cohen-Adad J, D'Ambrosio S, de Hollander G, de la Iglesia-Vayá M, de la Vega A, Delorme A, Devinsky O, Draschkow D, Duff EP, DuPre E, Earl E, Esteban O, Feingold FW, Flandin G, Galassi A, Gallitto G, Ganz M, Gau R, Gholam J, Ghosh SS, Giacomel A, Gillman AG, Gleeson P, Gramfort A, Guay S, Guidali G, Halchenko YO, Handwerker DA, Hardcastle N, Herholz P, Hermes D, Honey CJ, Innis RB, Ioanas HI, Jahn A, Karakuzu A, Keator DB, Kiar G, Kincses B, Laird AR, Lau JC, Lazari A, Legarreta JH, Li A, Li X, Love BC, Lu H, Marcantoni E, Maumet C, Mazzamuto G, Meisler SL, Mikkelsen M, Mutsaerts H, Nichols TE, Nikolaidis A, Nilsonne G, Niso G, Norgaard M, Okell TW, Oostenveld R, Ort E, Park PJ, Pawlik M, Pernet CR, Pestilli F, Petr J, Phillips C, Poline JB, Pollonini L, Raamana PR, Ritter P, Rizzo G, Robbins KA, Rockhill AP, Rogers C, Rokem A, Rorden C, Routier A, Saborit-Torres JM, Salo T, Schirner M, Smith RE, Spisak T, Sprenger J, Swann NC, Szinte M, Takerkart S, Thi… See abstract for full author list ➔ Poldrack RA, et al. Among authors: flandin g. ArXiv [Preprint]. 2024 Jan 9:arXiv:2309.05768v2. ArXiv. 2024. PMID: 37744469 Free PMC article. Preprint.
Author Correction: An analysis-ready and quality controlled resource for pediatric brain white-matter research.
Richie-Halford A, Cieslak M, Ai L, Caffarra S, Covitz S, Franco AR, Karipidis II, Kruper J, Milham M, Avelar-Pereira B, Roy E, Sydnor VJ, Yeatman JD; Fibr Community Science Consortium; Satterthwaite TD, Rokem A. Richie-Halford A, et al. Sci Data. 2023 Apr 28;10(1):247. doi: 10.1038/s41597-023-02137-8. Sci Data. 2023. PMID: 37117243 Free PMC article. No abstract available.
Neurodesk: An accessible, flexible, and portable data analysis environment for reproducible neuroimaging.
Renton AI, Dao TT, Johnstone T, Civier O, Sullivan RP, White DJ, Lyons P, Slade BM, Abbott DF, Amos TJ, Bollmann S, Botting A, Campbell MEJ, Chang J, Close TG, Eckstein K, Egan GF, Evas S, Flandin G, Garner KG, Garrido MI, Ghosh SS, Grignard M, Hannan AJ, Huber R, Kaczmarzyk JR, Kasper L, Kuhlmann L, Lou K, Mantilla-Ramos YJ, Mattingley JB, Morris J, Narayanan A, Pestilli F, Puce A, Ribeiro FL, Rogasch NC, Rorden C, Schira M, Shaw TB, Sowman PF, Spitz G, Stewart A, Ye X, Zhu JD, Hughes ME, Narayanan A, Bollmann S. Renton AI, et al. Among authors: flandin g. Res Sq [Preprint]. 2023 Mar 13:rs.3.rs-2649734. doi: 10.21203/rs.3.rs-2649734/v1. Res Sq. 2023. PMID: 36993557 Free PMC article. Updated. Preprint.
Genome-wide epigenetic and mRNA-expression profiling followed by CRISPR/Cas9-mediated gene-disruptions corroborate the MIR141/MIR200C-ZEB1/ZEB2-FGFR1 axis in acquired EMT-associated EGFR TKI-resistance in NSCLC cells.
Vad-Nielsen J, Staunstrup NH, Kjeldsen ML, Dybdal N, Flandin G, De Stradis C, Daugaard TF, Vilsbøll-Larsen T, Maansson CT, Doktor TK, Sorensen BS, Nielsen AL. Vad-Nielsen J, et al. Among authors: flandin g. Transl Lung Cancer Res. 2023 Jan 31;12(1):42-65. doi: 10.21037/tlcr-22-507. Epub 2023 Jan 13. Transl Lung Cancer Res. 2023. PMID: 36762066 Free PMC article.
Author Correction: An analysis-ready and quality controlled resource for pediatric brain white-matter research.
Richie-Halford A, Cieslak M, Ai L, Caffarra S, Covitz S, Franco AR, Karipidis II, Kruper J, Milham M, Avelar-Pereira B, Roy E, Sydnor VJ, Yeatman JD; Fibr Community Science Consortium; Satterthwaite TD, Rokem A. Richie-Halford A, et al. Sci Data. 2022 Nov 17;9(1):709. doi: 10.1038/s41597-022-01816-2. Sci Data. 2022. PMID: 36396653 Free PMC article. No abstract available.
Publisher Correction: An analysis-ready and quality controlled resource for pediatric brain white-matter research.
Richie-Halford A, Cieslak M, Ai L, Caffarra S, Covitz S, Franco AR, Karipidis II, Kruper J, Milham M, Avelar-Pereira B, Roy E, Sydnor VJ, Yeatman JD; Fibr Community Science Consortium; Satterthwaite TD, Rokem A. Richie-Halford A, et al. Sci Data. 2022 Oct 31;9(1):665. doi: 10.1038/s41597-022-01770-z. Sci Data. 2022. PMID: 36316349 Free PMC article. No abstract available.
An analysis-ready and quality controlled resource for pediatric brain white-matter research.
Richie-Halford A, Cieslak M, Ai L, Caffarra S, Covitz S, Franco AR, Karipidis II, Kruper J, Milham M, Avelar-Pereira B, Roy E, Sydnor VJ, Yeatman JD; Fibr Community Science Consortium; Satterthwaite TD, Rokem A. Richie-Halford A, et al. Sci Data. 2022 Oct 12;9(1):616. doi: 10.1038/s41597-022-01695-7. Sci Data. 2022. PMID: 36224186 Free PMC article.
Second waves, social distancing, and the spread of COVID-19 across the USA.
Friston KJ, Parr T, Zeidman P, Razi A, Flandin G, Daunizeau J, Hulme OJ, Billig AJ, Litvak V, Price CJ, Moran RJ, Lambert C. Friston KJ, et al. Among authors: flandin g. Wellcome Open Res. 2021 Mar 15;5:103. doi: 10.12688/wellcomeopenres.15986.3. eCollection 2020. Wellcome Open Res. 2021. PMID: 33954262 Free PMC article.
58 results