Fernández EA - Search Results

1

Novel evaluation approach for molecular signature-based deconvolution methods.

Nava A, Alves da Quinta D, Prato L, Girotti MR, Moron G, Llera AS, Fernández EA. Nava A, et al. Among authors: fernandez ea. J Biomed Inform. 2023 Jun;142:104387. doi: 10.1016/j.jbi.2023.104387. Epub 2023 May 10. J Biomed Inform. 2023. PMID: 37172634

2

Improving 2D-DIGE protein expression analysis by two-stage linear mixed models: assessing experimental effects in a melanoma cell study.

Fernández EA, Girotti MR, López del Olmo JA, Llera AS, Podhajcer OL, Cantet RJ, Balzarini M. Fernández EA, et al. Bioinformatics. 2008 Dec 1;24(23):2706-12. doi: 10.1093/bioinformatics/btn508. Epub 2008 Sep 25. Bioinformatics. 2008. PMID: 18818217

3

SPARC promotes cathepsin B-mediated melanoma invasiveness through a collagen I/α2β1 integrin axis.

Girotti MR, Fernández M, López JA, Camafeita E, Fernández EA, Albar JP, Benedetti LG, Valacco MP, Brekken RA, Podhajcer OL, Llera AS. Girotti MR, et al. Among authors: fernandez ea, fernandez m. J Invest Dermatol. 2011 Dec;131(12):2438-47. doi: 10.1038/jid.2011.239. Epub 2011 Aug 18. J Invest Dermatol. 2011. PMID: 21850018 Free article.

4

The multi-reference contrast method: facilitating set enrichment analysis.

Fresno C, Llera AS, Girotti MR, Valacco MP, López JA, Podhajcer OL, Balzarini MG, Prada F, Fernández EA. Fresno C, et al. Among authors: fernandez ea. Comput Biol Med. 2012 Feb;42(2):188-94. doi: 10.1016/j.compbiomed.2011.11.007. Epub 2012 Jan 9. Comput Biol Med. 2012. PMID: 22226646

5

Improving information retrieval in functional analysis.

Rodriguez JC, González GA, Fresno C, Llera AS, Fernández EA. Rodriguez JC, et al. Among authors: fernandez ea. Comput Biol Med. 2016 Dec 1;79:10-20. doi: 10.1016/j.compbiomed.2016.09.017. Epub 2016 Sep 24. Comput Biol Med. 2016. PMID: 27723507

6

Predictive Outcomes for HER2-enriched Cancer Using Growth and Metastasis Signatures Driven By SPARC.

Güttlein LN, Benedetti LG, Fresno C, Spallanzani RG, Mansilla SF, Rotondaro C, Raffo Iraolagoitia XL, Salvatierra E, Bravo AI, Fernández EA, Gottifredi V, Zwirner NW, Llera AS, Podhajcer OL. Güttlein LN, et al. Among authors: fernandez ea. Mol Cancer Res. 2017 Mar;15(3):304-316. doi: 10.1158/1541-7786.MCR-16-0243-T. Epub 2016 Dec 28. Mol Cancer Res. 2017. PMID: 28031408

7

A novel non-parametric method for uncertainty evaluation of correlation-based molecular signatures: its application on PAM50 algorithm.

Fresno C, González GA, Merino GA, Flesia AG, Podhajcer OL, Llera AS, Fernández EA. Fresno C, et al. Among authors: fernandez ea. Bioinformatics. 2017 Mar 1;33(5):693-700. doi: 10.1093/bioinformatics/btw704. Bioinformatics. 2017. PMID: 28062443

8

TarSeqQC: Quality control on targeted sequencing experiments in R.

Merino GA, Murua YA, Fresno C, Sendoya JM, Golubicki M, Iseas S, Coraglio M, Podhajcer OL, Llera AS, Fernández EA. Merino GA, et al. Among authors: fernandez ea. Hum Mutat. 2017 May;38(5):494-502. doi: 10.1002/humu.23204. Epub 2017 Mar 21. Hum Mutat. 2017. PMID: 28236343

9

Massive integrative gene set analysis enables functional characterization of breast cancer subtypes.

Rodriguez JC, Merino GA, Llera AS, Fernández EA. Rodriguez JC, et al. Among authors: fernandez ea. J Biomed Inform. 2019 May;93:103157. doi: 10.1016/j.jbi.2019.103157. Epub 2019 Mar 27. J Biomed Inform. 2019. PMID: 30928514 Free article.

10

Differential splicing analysis based on isoforms expression with NBSplice.

Merino GA, Fernández EA. Merino GA, et al. Among authors: fernandez ea. J Biomed Inform. 2020 Mar;103:103378. doi: 10.1016/j.jbi.2020.103378. Epub 2020 Jan 21. J Biomed Inform. 2020. PMID: 31972288 Free article.

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