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Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations.
Thorpe HA, Tourrette E, Yahara K, Vale FF, Liu S, Oleastro M, Alarcon T, Perets TT, Latifi-Navid S, Yamaoka Y, Martinez-Gonzalez B, Karayiannis I, Karamitros T, Sgouras DN, Elamin W, Pascoe B, Sheppard SK, Ronkainen J, Aro P, Engstrand L, Agreus L, Suerbaum S, Thorell K, Falush D. Thorpe HA, et al. Among authors: falush d. Nat Commun. 2022 Nov 11;13(1):6842. doi: 10.1038/s41467-022-34475-3. Nat Commun. 2022. PMID: 36369175 Free PMC article.
Analysis of 1321 Eubacterium rectale genomes from metagenomes uncovers complex phylogeographic population structure and subspecies functional adaptations.
Karcher N, Pasolli E, Asnicar F, Huang KD, Tett A, Manara S, Armanini F, Bain D, Duncan SH, Louis P, Zolfo M, Manghi P, Valles-Colomer M, Raffaetà R, Rota-Stabelli O, Collado MC, Zeller G, Falush D, Maixner F, Walker AW, Huttenhower C, Segata N. Karcher N, et al. Among authors: falush d. Genome Biol. 2020 Jun 8;21(1):138. doi: 10.1186/s13059-020-02042-y. Genome Biol. 2020. PMID: 32513234 Free PMC article.
Traces of human migrations in Helicobacter pylori populations.
Falush D, Wirth T, Linz B, Pritchard JK, Stephens M, Kidd M, Blaser MJ, Graham DY, Vacher S, Perez-Perez GI, Yamaoka Y, Mégraud F, Otto K, Reichard U, Katzowitsch E, Wang X, Achtman M, Suerbaum S. Falush D, et al. Science. 2003 Mar 7;299(5612):1582-5. doi: 10.1126/science.1080857. Science. 2003. PMID: 12624269
Genomic changes during chronic Helicobacter pylori infection.
Kraft C, Stack A, Josenhans C, Niehus E, Dietrich G, Correa P, Fox JG, Falush D, Suerbaum S. Kraft C, et al. Among authors: falush d. J Bacteriol. 2006 Jan;188(1):249-54. doi: 10.1128/JB.188.1.249-254.2006. J Bacteriol. 2006. PMID: 16352841 Free PMC article.
An African origin for the intimate association between humans and Helicobacter pylori.
Linz B, Balloux F, Moodley Y, Manica A, Liu H, Roumagnac P, Falush D, Stamer C, Prugnolle F, van der Merwe SW, Yamaoka Y, Graham DY, Perez-Trallero E, Wadstrom T, Suerbaum S, Achtman M. Linz B, et al. Among authors: falush d. Nature. 2007 Feb 22;445(7130):915-918. doi: 10.1038/nature05562. Epub 2007 Feb 7. Nature. 2007. PMID: 17287725 Free PMC article.
Campylobacter genotyping to determine the source of human infection.
Sheppard SK, Dallas JF, Strachan NJ, MacRae M, McCarthy ND, Wilson DJ, Gormley FJ, Falush D, Ogden ID, Maiden MC, Forbes KJ. Sheppard SK, et al. Among authors: falush d. Clin Infect Dis. 2009 Apr 15;48(8):1072-8. doi: 10.1086/597402. Clin Infect Dis. 2009. PMID: 19275496 Free PMC article.
Ethnic and geographic differentiation of Helicobacter pylori within Iran.
Latifi-Navid S, Ghorashi SA, Siavoshi F, Linz B, Massarrat S, Khegay T, Salmanian AH, Shayesteh AA, Masoodi M, Ghanadi K, Ganji A, Suerbaum S, Achtman M, Malekzadeh R, Falush D. Latifi-Navid S, et al. Among authors: falush d. PLoS One. 2010 Mar 22;5(3):e9645. doi: 10.1371/journal.pone.0009645. PLoS One. 2010. PMID: 20339588 Free PMC article.
79 results