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Roadmap for naming uncultivated Archaea and Bacteria.
Murray AE, Freudenstein J, Gribaldo S, Hatzenpichler R, Hugenholtz P, Kämpfer P, Konstantinidis KT, Lane CE, Papke RT, Parks DH, Rossello-Mora R, Stott MB, Sutcliffe IC, Thrash JC, Venter SN, Whitman WB, Acinas SG, Amann RI, Anantharaman K, Armengaud J, Baker BJ, Barco RA, Bode HB, Boyd ES, Brady CL, Carini P, Chain PSG, Colman DR, DeAngelis KM, de Los Rios MA, Estrada-de Los Santos P, Dunlap CA, Eisen JA, Emerson D, Ettema TJG, Eveillard D, Girguis PR, Hentschel U, Hollibaugh JT, Hug LA, Inskeep WP, Ivanova EP, Klenk HP, Li WJ, Lloyd KG, Löffler FE, Makhalanyane TP, Moser DP, Nunoura T, Palmer M, Parro V, Pedrós-Alió C, Probst AJ, Smits THM, Steen AD, Steenkamp ET, Spang A, Stewart FJ, Tiedje JM, Vandamme P, Wagner M, Wang FP, Yarza P, Hedlund BP, Reysenbach AL. Murray AE, et al. Nat Microbiol. 2020 Aug;5(8):987-994. doi: 10.1038/s41564-020-0733-x. Epub 2020 Jun 8. Nat Microbiol. 2020. PMID: 32514073 Free PMC article. Review.
Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae.
Estrada-de Los Santos P, Palmer M, Chávez-Ramírez B, Beukes C, Steenkamp ET, Briscoe L, Khan N, Maluk M, Lafos M, Humm E, Arrabit M, Crook M, Gross E, Simon MF, Dos Reis Junior FB, Whitman WB, Shapiro N, Poole PS, Hirsch AM, Venter SN, James EK. Estrada-de Los Santos P, et al. Genes (Basel). 2018 Aug 1;9(8):389. doi: 10.3390/genes9080389. Genes (Basel). 2018. PMID: 30071618 Free PMC article.
Trinickia dabaoshanensis sp. nov., a new name for a lost species.
Estrada-de Los Santos P, Palmer M, Steenkamp ET, Maluk M, Beukes C, Hirsch AM, James EK, Venter SN. Estrada-de Los Santos P, et al. Arch Microbiol. 2019 Nov;201(9):1313-1316. doi: 10.1007/s00203-019-01703-2. Epub 2019 Jul 11. Arch Microbiol. 2019. PMID: 31297578
Paraburkholderia lycopersici sp. nov., a nitrogen-fixing species isolated from rhizoplane of Lycopersicon esculentum Mill. var. Saladette in Mexico.
Tapia-García EY, Arroyo-Herrera I, Rojas-Rojas FU, Ibarra JA, Vásquez-Murrieta MS, Martínez-Aguilar L, López-Lara IM, Whitman WB, Estrada de Los Santos P. Tapia-García EY, et al. Syst Appl Microbiol. 2020 Nov;43(6):126133. doi: 10.1016/j.syapm.2020.126133. Epub 2020 Sep 15. Syst Appl Microbiol. 2020. PMID: 32998072
Author Correction: Roadmap for naming uncultivated Archaea and Bacteria.
Murray AE, Freudenstein J, Gribaldo S, Hatzenpichler R, Hugenholtz P, Kämpfer P, Konstantinidis KT, Lane CE, Papke RT, Parks DH, Rossello-Mora R, Stott MB, Sutcliffe IC, Thrash JC, Venter SN, Whitman WB, Acinas SG, Amann RI, Anantharaman K, Armengaud J, Baker BJ, Barco RA, Bode HB, Boyd ES, Brady CL, Carini P, Chain PSG, Colman DR, DeAngelis KM, de Los Rios MA, Estrada-de Los Santos P, Dunlap CA, Eisen JA, Emerson D, Ettema TJG, Eveillard D, Girguis PR, Hentschel U, Hollibaugh JT, Hug LA, Inskeep WP, Ivanova EP, Klenk HP, Li WJ, Lloyd KG, Löffler FE, Makhalanyane TP, Moser DP, Nunoura T, Palmer M, Parro V, Pedrós-Alió C, Probst AJ, Smits THM, Steen AD, Steenkamp ET, Spang A, Stewart FJ, Tiedje JM, Vandamme P, Wagner M, Wang FP, Yarza P, Hedlund BP, Reysenbach AL. Murray AE, et al. Nat Microbiol. 2021 Jan;6(1):136. doi: 10.1038/s41564-020-00827-2. Nat Microbiol. 2021. PMID: 33184503 Free PMC article. No abstract available.
Thousands of small, novel genes predicted in global phage genomes.
Fremin BJ, Bhatt AS, Kyrpides NC; Global Phage Small Open Reading Frame (GP-SmORF) Consortium. Fremin BJ, et al. Cell Rep. 2022 Jun 21;39(12):110984. doi: 10.1016/j.celrep.2022.110984. Cell Rep. 2022. PMID: 35732113 Free PMC article.
56 results