Engreitz JM - Search Results

1

Genome-wide enhancer maps link risk variants to disease genes.

Nasser J, Bergman DT, Fulco CP, Guckelberger P, Doughty BR, Patwardhan TA, Jones TR, Nguyen TH, Ulirsch JC, Lekschas F, Mualim K, Natri HM, Weeks EM, Munson G, Kane M, Kang HY, Cui A, Ray JP, Eisenhaure TM, Collins RL, Dey K, Pfister H, Price AL, Epstein CB, Kundaje A, Xavier RJ, Daly MJ, Huang H, Finucane HK, Hacohen N, Lander ES, Engreitz JM. Nasser J, et al. Among authors: engreitz jm. Nature. 2021 May;593(7858):238-243. doi: 10.1038/s41586-021-03446-x. Epub 2021 Apr 7. Nature. 2021. PMID: 33828297 Free PMC article.

2

The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome.

Engreitz JM, Pandya-Jones A, McDonel P, Shishkin A, Sirokman K, Surka C, Kadri S, Xing J, Goren A, Lander ES, Plath K, Guttman M. Engreitz JM, et al. Science. 2013 Aug 16;341(6147):1237973. doi: 10.1126/science.1237973. Epub 2013 Jul 4. Science. 2013. PMID: 23828888 Free PMC article.

3

Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre.

Hacisuleyman E, Goff LA, Trapnell C, Williams A, Henao-Mejia J, Sun L, McClanahan P, Hendrickson DG, Sauvageau M, Kelley DR, Morse M, Engreitz J, Lander ES, Guttman M, Lodish HF, Flavell R, Raj A, Rinn JL. Hacisuleyman E, et al. Nat Struct Mol Biol. 2014 Feb;21(2):198-206. doi: 10.1038/nsmb.2764. Epub 2014 Jan 26. Nat Struct Mol Biol. 2014. PMID: 24463464 Free PMC article.

4

Transcriptome-wide mapping reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA.

Schwartz S, Bernstein DA, Mumbach MR, Jovanovic M, Herbst RH, León-Ricardo BX, Engreitz JM, Guttman M, Satija R, Lander ES, Fink G, Regev A. Schwartz S, et al. Among authors: engreitz jm. Cell. 2014 Sep 25;159(1):148-162. doi: 10.1016/j.cell.2014.08.028. Epub 2014 Sep 11. Cell. 2014. PMID: 25219674 Free PMC article.

5

RNA-RNA interactions enable specific targeting of noncoding RNAs to nascent Pre-mRNAs and chromatin sites.

Engreitz JM, Sirokman K, McDonel P, Shishkin AA, Surka C, Russell P, Grossman SR, Chow AY, Guttman M, Lander ES. Engreitz JM, et al. Cell. 2014 Sep 25;159(1):188-199. doi: 10.1016/j.cell.2014.08.018. Cell. 2014. PMID: 25259926 Free PMC article.

6

RNA antisense purification (RAP) for mapping RNA interactions with chromatin.

Engreitz J, Lander ES, Guttman M. Engreitz J, et al. Methods Mol Biol. 2015;1262:183-97. doi: 10.1007/978-1-4939-2253-6_11. Methods Mol Biol. 2015. PMID: 25555582

7

Systematic mapping of functional enhancer-promoter connections with CRISPR interference.

Fulco CP, Munschauer M, Anyoha R, Munson G, Grossman SR, Perez EM, Kane M, Cleary B, Lander ES, Engreitz JM. Fulco CP, et al. Among authors: engreitz jm. Science. 2016 Nov 11;354(6313):769-773. doi: 10.1126/science.aag2445. Epub 2016 Sep 29. Science. 2016. PMID: 27708057 Free PMC article.

8

Long non-coding RNAs: spatial amplifiers that control nuclear structure and gene expression.

Engreitz JM, Ollikainen N, Guttman M. Engreitz JM, et al. Nat Rev Mol Cell Biol. 2016 Dec;17(12):756-770. doi: 10.1038/nrm.2016.126. Epub 2016 Oct 26. Nat Rev Mol Cell Biol. 2016. PMID: 27780979 Review.

9

Local regulation of gene expression by lncRNA promoters, transcription and splicing.

Engreitz JM, Haines JE, Perez EM, Munson G, Chen J, Kane M, McDonel PE, Guttman M, Lander ES. Engreitz JM, et al. Nature. 2016 Nov 17;539(7629):452-455. doi: 10.1038/nature20149. Epub 2016 Oct 26. Nature. 2016. PMID: 27783602 Free PMC article.

10

Systematic dissection of genomic features determining transcription factor binding and enhancer function.

Grossman SR, Zhang X, Wang L, Engreitz J, Melnikov A, Rogov P, Tewhey R, Isakova A, Deplancke B, Bernstein BE, Mikkelsen TS, Lander ES. Grossman SR, et al. Proc Natl Acad Sci U S A. 2017 Feb 14;114(7):E1291-E1300. doi: 10.1073/pnas.1621150114. Epub 2017 Jan 30. Proc Natl Acad Sci U S A. 2017. PMID: 28137873 Free PMC article.

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