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Knowledge-guided analysis of "omics" data using the KnowEnG cloud platform.
Blatti C 3rd, Emad A, Berry MJ, Gatzke L, Epstein M, Lanier D, Rizal P, Ge J, Liao X, Sobh O, Lambert M, Post CS, Xiao J, Groves P, Epstein AT, Chen X, Srinivasan S, Lehnert E, Kalari KR, Wang L, Weinshilboum RM, Song JS, Jongeneel CV, Han J, Ravaioli U, Sobh N, Bushell CB, Sinha S. Blatti C 3rd, et al. Among authors: emad a. PLoS Biol. 2020 Jan 23;18(1):e3000583. doi: 10.1371/journal.pbio.3000583. eCollection 2020 Jan. PLoS Biol. 2020. PMID: 31971940 Free PMC article.
A new correlation clustering method for cancer mutation analysis.
Hou JP, Emad A, Puleo GJ, Ma J, Milenkovic O. Hou JP, et al. Among authors: emad a. Bioinformatics. 2016 Dec 15;32(24):3717-3728. doi: 10.1093/bioinformatics/btw546. Epub 2016 Aug 18. Bioinformatics. 2016. PMID: 27540270 Free PMC article.
MARSY: a multitask deep-learning framework for prediction of drug combination synergy scores.
El Khili MR, Memon SA, Emad A. El Khili MR, et al. Among authors: emad a. Bioinformatics. 2023 Apr 3;39(4):btad177. doi: 10.1093/bioinformatics/btad177. Bioinformatics. 2023. PMID: 37021933 Free PMC article.
MOTIVATION: Combination therapies have emerged as a treatment strategy for cancers to reduce the probability of drug resistance and to improve outcomes. ...AVAILABILITY AND IMPLEMENTATION: An implementation of the algorithms in Python and cleaned input datasets are provide …
MOTIVATION: Combination therapies have emerged as a treatment strategy for cancers to reduce the probability of drug resistance and t …
71 results