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NMR: Unique Strengths That Enhance Modern Metabolomics Research.
Edison AS, Colonna M, Gouveia GJ, Holderman NR, Judge MT, Shen X, Zhang S. Edison AS, et al. Anal Chem. 2021 Jan 12;93(1):478-499. doi: 10.1021/acs.analchem.0c04414. Epub 2020 Nov 12. Anal Chem. 2021. PMID: 33180470 Review. No abstract available.
¹³C NMR metabolomics: applications at natural abundance.
Clendinen CS, Lee-McMullen B, Williams CM, Stupp GS, Vandenborne K, Hahn DA, Walter GA, Edison AS. Clendinen CS, et al. Among authors: edison as. Anal Chem. 2014 Sep 16;86(18):9242-50. doi: 10.1021/ac502346h. Epub 2014 Aug 29. Anal Chem. 2014. PMID: 25140385 Free PMC article.
(13)C NMR Metabolomics: INADEQUATE Network Analysis.
Clendinen CS, Pasquel C, Ajredini R, Edison AS. Clendinen CS, et al. Among authors: edison as. Anal Chem. 2015 Jun 2;87(11):5698-706. doi: 10.1021/acs.analchem.5b00867. Epub 2015 May 14. Anal Chem. 2015. PMID: 25932900 Free PMC article.
Continuous in vivo Metabolism by NMR.
Judge MT, Wu Y, Tayyari F, Hattori A, Glushka J, Ito T, Arnold J, Edison AS. Judge MT, et al. Among authors: edison as. Front Mol Biosci. 2019 Apr 30;6:26. doi: 10.3389/fmolb.2019.00026. eCollection 2019. Front Mol Biosci. 2019. PMID: 31114791 Free PMC article.
RTExtract: time-series NMR spectra quantification based on 3D surface ridge tracking.
Wu Y, Judge MT, Arnold J, Bhandarkar SM, Edison AS. Wu Y, et al. Among authors: edison as. Bioinformatics. 2020 Dec 22;36(20):5068-5075. doi: 10.1093/bioinformatics/btaa631. Bioinformatics. 2020. PMID: 32653900 Free PMC article.
RESULTS: We introduce Ridge Tracking-based Extract (RTExtract), a computer vision-based algorithm, to quantify time-series NMR spectra. The NMR spectra of multiple time points were formulated as a 3D surface. Candidate points were first filtered using local curvature and o …
RESULTS: We introduce Ridge Tracking-based Extract (RTExtract), a computer vision-based algorithm, to quantify time-series NMR spectra. The …
141 results