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2016 3
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2020 5
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13 results

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Page 1
Rapid directed molecular evolution of fluorescent proteins in mammalian cells.
Babakhanova S, Jung EE, Namikawa K, Zhang H, Wang Y, Subach OM, Korzhenevskiy DA, Rakitina TV, Xiao X, Wang W, Shi J, Drobizhev M, Park D, Eisenhard L, Tang H, Köster RW, Subach FV, Boyden ES, Piatkevich KD. Babakhanova S, et al. Among authors: korzhenevskiy da. Protein Sci. 2022 Mar;31(3):728-751. doi: 10.1002/pro.4261. Epub 2021 Dec 30. Protein Sci. 2022. PMID: 34913537 Free PMC article.
FGCaMP7, an Improved Version of Fungi-Based Ratiometric Calcium Indicator for In Vivo Visualization of Neuronal Activity.
Barykina NV, Sotskov VP, Gruzdeva AM, Wu YK, Portugues R, Subach OM, Chefanova ES, Plusnin VV, Ivashkina OI, Anokhin KV, Vlaskina AV, Korzhenevskiy DA, Nikolaeva AY, Boyko KM, Rakitina TV, Varizhuk AM, Pozmogova GE, Subach FV. Barykina NV, et al. Among authors: korzhenevskiy da. Int J Mol Sci. 2020 Apr 24;21(8):3012. doi: 10.3390/ijms21083012. Int J Mol Sci. 2020. PMID: 32344594 Free PMC article.
Novel Genetically Encoded Bright Positive Calcium Indicator NCaMP7 Based on the mNeonGreen Fluorescent Protein.
Subach OM, Sotskov VP, Plusnin VV, Gruzdeva AM, Barykina NV, Ivashkina OI, Anokhin KV, Nikolaeva AY, Korzhenevskiy DA, Vlaskina AV, Lazarenko VA, Boyko KM, Rakitina TV, Varizhuk AM, Pozmogova GE, Podgorny OV, Piatkevich KD, Boyden ES, Subach FV. Subach OM, et al. Among authors: korzhenevskiy da. Int J Mol Sci. 2020 Feb 28;21(5):1644. doi: 10.3390/ijms21051644. Int J Mol Sci. 2020. PMID: 32121243 Free PMC article.
Molecular dynamics complemented by site-directed mutagenesis reveals significant difference between the interdomain salt bridge networks stabilizing oligopeptidases B from bacteria and protozoa in their active conformations.
Petrenko DE, Mikhailova AG, Timofeev VI, Agapova YК, Karlinsky DM, Komolov AS, Korzhenevskiy DA, Vlaskina AV, Rumsh LD, Rakitina TV. Petrenko DE, et al. Among authors: korzhenevskiy da. J Biomol Struct Dyn. 2020 Oct;38(16):4868-4882. doi: 10.1080/07391102.2019.1692694. Epub 2019 Nov 25. J Biomol Struct Dyn. 2020. PMID: 31724904
Dodecamers derived from the crystal structure were found in the pre-crystallization solution of the transaminase from the thermophilic bacterium Thermobaculum terrenum by small-angle X-ray scattering.
Marchenkova MA, Konarev PV, Rakitina TV, Timofeev VI, Boikova AS, Dyakova YA, Ilina KB, Korzhenevskiy DA, Yu Nikolaeva A, Pisarevsky YV, Kovalchuk MV. Marchenkova MA, et al. Among authors: korzhenevskiy da. J Biomol Struct Dyn. 2020 Jul;38(10):2939-2944. doi: 10.1080/07391102.2019.1649195. Epub 2019 Aug 8. J Biomol Struct Dyn. 2020. PMID: 31347457
Identification, functional and structural characterization of novel aminoglycoside phosphotransferase APH(3″)-Id from Streptomyces rimosus subsp. rimosus ATCC 10970.
Alekseeva MG, Boyko KM, Nikolaeva AY, Mavletova DA, Rudakova NN, Zakharevich NV, Korzhenevskiy DA, Ziganshin RH, Popov VO, Danilenko VN. Alekseeva MG, et al. Among authors: korzhenevskiy da. Arch Biochem Biophys. 2019 Aug 15;671:111-122. doi: 10.1016/j.abb.2019.06.008. Epub 2019 Jun 26. Arch Biochem Biophys. 2019. PMID: 31251922
Structural plasticity and thermal stability of the histone-like protein from Spiroplasma melliferum are due to phenylalanine insertions into the conservative scaffold.
Timofeev VI, Altukhov DA, Talyzina AA, Agapova YK, Vlaskina AV, Korzhenevskiy DA, Kleymenov SY, Bocharov EV, Rakitina TV. Timofeev VI, et al. Among authors: korzhenevskiy da. J Biomol Struct Dyn. 2018 Dec;36(16):4392-4404. doi: 10.1080/07391102.2017.1417162. Epub 2018 Jan 7. J Biomol Struct Dyn. 2018. PMID: 29283021
Activity modulation of the oligopeptidase B from Serratia proteamaculans by site-directed mutagenesis of amino acid residues surrounding catalytic triad histidine.
Mikhailova AG, Rakitina TV, Timofeev VI, Karlinsky DM, Korzhenevskiy DA, Agapova YК, Vlaskina AV, Ovchinnikova MV, Gorlenko VA, Rumsh LD. Mikhailova AG, et al. Among authors: korzhenevskiy da. Biochimie. 2017 Aug;139:125-136. doi: 10.1016/j.biochi.2017.05.013. Epub 2017 May 27. Biochimie. 2017. PMID: 28554571
13 results