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Chromatin alternates between A and B compartments at kilobase scale for subgenic organization.
Harris HL, Gu H, Olshansky M, Wang A, Farabella I, Eliaz Y, Kalluchi A, Krishna A, Jacobs M, Cauer G, Pham M, Rao SSP, Dudchenko O, Omer A, Mohajeri K, Kim S, Nichols MH, Davis ES, Gkountaroulis D, Udupa D, Aiden AP, Corces VG, Phanstiel DH, Noble WS, Nir G, Di Pierro M, Seo JS, Talkowski ME, Aiden EL, Rowley MJ. Harris HL, et al. Among authors: di pierro m. Nat Commun. 2023 Jun 6;14(1):3303. doi: 10.1038/s41467-023-38429-1. Nat Commun. 2023. PMID: 37280210 Free PMC article.
An associative memory Hamiltonian model for DNA and nucleosomes.
Lu W, Onuchic JN, Di Pierro M. Lu W, et al. Among authors: di pierro m. PLoS Comput Biol. 2023 Mar 27;19(3):e1011013. doi: 10.1371/journal.pcbi.1011013. eCollection 2023 Mar. PLoS Comput Biol. 2023. PMID: 36972316 Free PMC article.
A Liquid State Perspective on Dynamics of Chromatin Compartments.
Laghmach R, Di Pierro M, Potoyan D. Laghmach R, et al. Among authors: di pierro m. Front Mol Biosci. 2022 Jan 13;8:781981. doi: 10.3389/fmolb.2021.781981. eCollection 2021. Front Mol Biosci. 2022. PMID: 35096966 Free PMC article. Review.
53 results