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A Comprehensive Evaluation of Consensus Spectrum Generation Methods in Proteomics.
Luo X, Bittremieux W, Griss J, Deutsch EW, Sachsenberg T, Levitsky LI, Ivanov MV, Bubis JA, Gabriels R, Webel H, Sanchez A, Bai M, Käll L, Perez-Riverol Y. Luo X, et al. Among authors: deutsch ew. J Proteome Res. 2022 Jun 3;21(6):1566-1574. doi: 10.1021/acs.jproteome.2c00069. Epub 2022 May 13. J Proteome Res. 2022. PMID: 35549218 Free PMC article.
The mzIdentML data standard for mass spectrometry-based proteomics results.
Jones AR, Eisenacher M, Mayer G, Kohlbacher O, Siepen J, Hubbard SJ, Selley JN, Searle BC, Shofstahl J, Seymour SL, Julian R, Binz PA, Deutsch EW, Hermjakob H, Reisinger F, Griss J, Vizcaíno JA, Chambers M, Pizarro A, Creasy D. Jones AR, et al. Among authors: deutsch ew. Mol Cell Proteomics. 2012 Jul;11(7):M111.014381. doi: 10.1074/mcp.M111.014381. Epub 2012 Feb 27. Mol Cell Proteomics. 2012. PMID: 22375074 Free PMC article.
The state of the human proteome in 2012 as viewed through PeptideAtlas.
Farrah T, Deutsch EW, Hoopmann MR, Hallows JL, Sun Z, Huang CY, Moritz RL. Farrah T, et al. Among authors: deutsch ew. J Proteome Res. 2013 Jan 4;12(1):162-71. doi: 10.1021/pr301012j. Epub 2012 Dec 5. J Proteome Res. 2013. PMID: 23215161 Free PMC article.
A chromosome-centric human proteome project (C-HPP) to characterize the sets of proteins encoded in chromosome 17.
Liu S, Im H, Bairoch A, Cristofanilli M, Chen R, Deutsch EW, Dalton S, Fenyo D, Fanayan S, Gates C, Gaudet P, Hincapie M, Hanash S, Kim H, Jeong SK, Lundberg E, Mias G, Menon R, Mu Z, Nice E, Paik YK, Uhlen M, Wells L, Wu SL, Yan F, Zhang F, Zhang Y, Snyder M, Omenn GS, Beavis RC, Hancock WS. Liu S, et al. Among authors: deutsch ew. J Proteome Res. 2013 Jan 4;12(1):45-57. doi: 10.1021/pr300985j. Epub 2012 Dec 21. J Proteome Res. 2013. PMID: 23259914 Free PMC article.
The mzQuantML data standard for mass spectrometry-based quantitative studies in proteomics.
Walzer M, Qi D, Mayer G, Uszkoreit J, Eisenacher M, Sachsenberg T, Gonzalez-Galarza FF, Fan J, Bessant C, Deutsch EW, Reisinger F, Vizcaíno JA, Medina-Aunon JA, Albar JP, Kohlbacher O, Jones AR. Walzer M, et al. Among authors: deutsch ew. Mol Cell Proteomics. 2013 Aug;12(8):2332-40. doi: 10.1074/mcp.O113.028506. Epub 2013 Apr 18. Mol Cell Proteomics. 2013. PMID: 23599424 Free PMC article.
189 results