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Microbial communities of the Lemon Creek Glacier show subtle structural variation yet stable phylogenetic composition over space and time.
Front Microbiol. 2015 May 20;6:495. doi: 10.3389/fmicb.2015.00495. eCollection 2015.
Front Microbiol. 2015.
PMID: 26042114
Free PMC article.
Cyanobacterial harmful algal blooms are a biological disturbance to Western Lake Erie bacterial communities.
Berry MA, Davis TW, Cory RM, Duhaime MB, Johengen TH, Kling GW, Marino JA, Den Uyl PA, Gossiaux D, Dick GJ, Denef VJ.
Berry MA, et al. Among authors: den uyl pa.
Environ Microbiol. 2017 Mar;19(3):1149-1162. doi: 10.1111/1462-2920.13640. Epub 2017 Feb 16.
Environ Microbiol. 2017.
PMID: 28026093
Free article.
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Unraveling the Physiological Roles of the Cyanobacterium Geitlerinema sp. BBD and Other Black Band Disease Community Members through Genomic Analysis of a Mixed Culture.
Den Uyl PA, Richardson LL, Jain S, Dick GJ.
Den Uyl PA, et al.
PLoS One. 2016 Jun 23;11(6):e0157953. doi: 10.1371/journal.pone.0157953. eCollection 2016.
PLoS One. 2016.
PMID: 27336619
Free PMC article.
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Metagenomic and Metatranscriptomic Insights into Population Diversity of Microcystis Blooms: Spatial and Temporal Dynamics of mcy Genotypes, Including a Partial Operon That Can Be Abundant and Expressed.
Yancey CE, Smith DJ, Den Uyl PA, Mohamed OG, Yu F, Ruberg SA, Chaffin JD, Goodwin KD, Tripathi A, Sherman DH, Dick GJ.
Yancey CE, et al. Among authors: den uyl pa.
Appl Environ Microbiol. 2022 May 10;88(9):e0246421. doi: 10.1128/aem.02464-21. Epub 2022 Apr 19.
Appl Environ Microbiol. 2022.
PMID: 35438519
Free PMC article.
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Comparative analysis of Microcystis buoyancy in western Lake Erie and Saginaw Bay of Lake Huron.
Den Uyl PA, Harrison SB, Godwin CM, Rowe MD, Strickler JR, Vanderploeg HA.
Den Uyl PA, et al.
Harmful Algae. 2021 Aug;108:102102. doi: 10.1016/j.hal.2021.102102. Epub 2021 Sep 15.
Harmful Algae. 2021.
PMID: 34588123
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Tourmaline: A containerized workflow for rapid and iterable amplicon sequence analysis using QIIME 2 and Snakemake.
Thompson LR, Anderson SR, Den Uyl PA, Patin NV, Lim SJ, Sanderson G, Goodwin KD.
Thompson LR, et al. Among authors: den uyl pa.
Gigascience. 2022 Jul 28;11:giac066. doi: 10.1093/gigascience/giac066.
Gigascience. 2022.
PMID: 35902092
Free PMC article.
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