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Chromosome-level genomes of multicellular algal sisters to land plants illuminate signaling network evolution.
Feng X, Zheng J, Irisarri I, Yu H, Zheng B, Ali Z, de Vries S, Keller J, Fürst-Jansen JMR, Dadras A, Zegers JMS, Rieseberg TP, Ashok AD, Darienko T, Bierenbroodspot MJ, Gramzow L, Petroll R, Haas FB, Fernandez-Pozo N, Nousias O, Li T, Fitzek E, Grayburn WS, Rittmeier N, Permann C, Rümpler F, Archibald JM, Theißen G, Mower JP, Lorenz M, Buschmann H, von Schwartzenberg K, Boston L, Hayes RD, Daum C, Barry K, Grigoriev IV, Wang X, Li FW, Rensing SA, Ari JB, Keren N, Mosquna A, Holzinger A, Delaux PM, Zhang C, Huang J, Mutwil M, de Vries J, Yin Y. Feng X, et al. Among authors: daum c. bioRxiv [Preprint]. 2023 Feb 1:2023.01.31.526407. doi: 10.1101/2023.01.31.526407. bioRxiv. 2023. PMID: 36778228 Free PMC article. Preprint.
Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems.
Kourist R, Bracharz F, Lorenzen J, Kracht ON, Chovatia M, Daum C, Deshpande S, Lipzen A, Nolan M, Ohm RA, Grigoriev IV, Sun S, Heitman J, Brück T, Nowrousian M. Kourist R, et al. Among authors: daum c. mBio. 2015 Jul 21;6(4):e00918. doi: 10.1128/mBio.00918-15. mBio. 2015. PMID: 26199329 Free PMC article.
Draft Genome Sequences of Three Monokaryotic Isolates of the White-Rot Basidiomycete Fungus Dichomitus squalens.
Casado López S, Peng M, Daly P, Andreopoulos B, Pangilinan J, Lipzen A, Riley R, Ahrendt S, Ng V, Barry K, Daum C, Grigoriev IV, Hildén KS, Mäkelä MR, de Vries RP. Casado López S, et al. Among authors: daum c. Microbiol Resour Announc. 2019 May 2;8(18):e00264-19. doi: 10.1128/MRA.00264-19. Microbiol Resour Announc. 2019. PMID: 31048399 Free PMC article.
PEATmoss (Physcomitrella Expression Atlas Tool): a unified gene expression atlas for the model plant Physcomitrella patens.
Fernandez-Pozo N, Haas FB, Meyberg R, Ullrich KK, Hiss M, Perroud PF, Hanke S, Kratz V, Powell AF, Vesty EF, Daum CG, Zane M, Lipzen A, Sreedasyam A, Grimwood J, Coates JC, Barry K, Schmutz J, Mueller LA, Rensing SA. Fernandez-Pozo N, et al. Among authors: daum cg. Plant J. 2020 Apr;102(1):165-177. doi: 10.1111/tpj.14607. Epub 2020 Jan 11. Plant J. 2020. PMID: 31714620 Free article.
Experimentally Validated Reconstruction and Analysis of a Genome-Scale Metabolic Model of an Anaerobic Neocallimastigomycota Fungus.
Wilken SE, Monk JM, Leggieri PA, Lawson CE, Lankiewicz TS, Seppälä S, Daum CG, Jenkins J, Lipzen AM, Mondo SJ, Barry KW, Grigoriev IV, Henske JK, Theodorou MK, Palsson BO, Petzold LR, O'Malley MA. Wilken SE, et al. mSystems. 2021 Feb 16;6(1):e00002-21. doi: 10.1128/mSystems.00002-21. mSystems. 2021. PMID: 33594000 Free PMC article.
Gene-rich UV sex chromosomes harbor conserved regulators of sexual development.
Carey SB, Jenkins J, Lovell JT, Maumus F, Sreedasyam A, Payton AC, Shu S, Tiley GP, Fernandez-Pozo N, Healey A, Barry K, Chen C, Wang M, Lipzen A, Daum C, Saski CA, McBreen JC, Conrad RE, Kollar LM, Olsson S, Huttunen S, Landis JB, Burleigh JG, Wickett NJ, Johnson MG, Rensing SA, Grimwood J, Schmutz J, McDaniel SF. Carey SB, et al. Among authors: daum c. Sci Adv. 2021 Jun 30;7(27):eabh2488. doi: 10.1126/sciadv.abh2488. Print 2021 Jun. Sci Adv. 2021. PMID: 34193417 Free PMC article.
187 results