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A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility.
Abrams MB, Bjaalie JG, Das S, Egan GF, Ghosh SS, Goscinski WJ, Grethe JS, Kotaleski JH, Ho ETW, Kennedy DN, Lanyon LJ, Leergaard TB, Mayberg HS, Milanesi L, Mouček R, Poline JB, Roy PK, Strother SC, Tang TB, Tiesinga P, Wachtler T, Wójcik DK, Martone ME. Abrams MB, et al. Among authors: das s. Neuroinformatics. 2022 Jan;20(1):25-36. doi: 10.1007/s12021-020-09509-0. Epub 2021 Jan 27. Neuroinformatics. 2022. PMID: 33506383 Free PMC article. Review.
The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments.
Gorgolewski KJ, Auer T, Calhoun VD, Craddock RC, Das S, Duff EP, Flandin G, Ghosh SS, Glatard T, Halchenko YO, Handwerker DA, Hanke M, Keator D, Li X, Michael Z, Maumet C, Nichols BN, Nichols TE, Pellman J, Poline JB, Rokem A, Schaefer G, Sochat V, Triplett W, Turner JA, Varoquaux G, Poldrack RA. Gorgolewski KJ, et al. Among authors: das s. Sci Data. 2016 Jun 21;3:160044. doi: 10.1038/sdata.2016.44. Sci Data. 2016. PMID: 27326542 Free PMC article.
Sharing brain mapping statistical results with the neuroimaging data model.
Maumet C, Auer T, Bowring A, Chen G, Das S, Flandin G, Ghosh S, Glatard T, Gorgolewski KJ, Helmer KG, Jenkinson M, Keator DB, Nichols BN, Poline JB, Reynolds R, Sochat V, Turner J, Nichols TE. Maumet C, et al. Among authors: das s. Sci Data. 2016 Dec 6;3:160102. doi: 10.1038/sdata.2016.102. Sci Data. 2016. PMID: 27922621 Free PMC article.
Cyberinfrastructure for Open Science at the Montreal Neurological Institute.
Das S, Glatard T, Rogers C, Saigle J, Paiva S, MacIntyre L, Safi-Harab M, Rousseau ME, Stirling J, Khalili-Mahani N, MacFarlane D, Kostopoulos P, Rioux P, Madjar C, Lecours-Boucher X, Vanamala S, Adalat R, Mohaddes Z, Fonov VS, Milot S, Leppert I, Degroot C, Durcan TM, Campbell T, Moreau J, Dagher A, Collins DL, Karamchandani J, Bar-Or A, Fon EA, Hoge R, Baillet S, Rouleau G, Evans AC. Das S, et al. Front Neuroinform. 2017 Jan 6;10:53. doi: 10.3389/fninf.2016.00053. eCollection 2016. Front Neuroinform. 2017. PMID: 28111547 Free PMC article.
Best practices in data analysis and sharing in neuroimaging using MRI.
Nichols TE, Das S, Eickhoff SB, Evans AC, Glatard T, Hanke M, Kriegeskorte N, Milham MP, Poldrack RA, Poline JB, Proal E, Thirion B, Van Essen DC, White T, Yeo BT. Nichols TE, et al. Among authors: das s. Nat Neurosci. 2017 Feb 23;20(3):299-303. doi: 10.1038/nn.4500. Nat Neurosci. 2017. PMID: 28230846 Free PMC article. Review.
National Neuroinformatics Framework for Canadian Consortium on Neurodegeneration in Aging (CCNA).
Mohaddes Z, Das S, Abou-Haidar R, Safi-Harab M, Blader D, Callegaro J, Henri-Bellemare C, Tunteng JF, Evans L, Campbell T, Lo D, Morin PE, Whitehead V, Chertkow H, Evans AC. Mohaddes Z, et al. Among authors: das s. Front Neuroinform. 2018 Dec 21;12:85. doi: 10.3389/fninf.2018.00085. eCollection 2018. Front Neuroinform. 2018. PMID: 30622468 Free PMC article.
A Quantitative EEG Toolbox for the MNI Neuroinformatics Ecosystem: Normative SPM of EEG Source Spectra.
Bosch-Bayard J, Aubert-Vazquez E, Brown ST, Rogers C, Kiar G, Glatard T, Scaria L, Galan-Garcia L, Bringas-Vega ML, Virues-Alba T, Taheri A, Das S, Madjar C, Mohaddes Z, MacIntyre L; CHBMP; Evans AC, Valdes-Sosa PA. Bosch-Bayard J, et al. Among authors: das s. Front Neuroinform. 2020 Aug 7;14:33. doi: 10.3389/fninf.2020.00033. eCollection 2020. Front Neuroinform. 2020. PMID: 32848689 Free PMC article.
Correction to: A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility.
Abrams MB, Bjaalie JG, Das S, Egan GF, Ghosh SS, Goscinski WJ, Grethe JS, Kotaleski JH, Ho ETW, Kennedy DN, Lanyon LJ, Leergaard TB, Mayberg HS, Milanesi L, Mouček R, Poline JB, Roy PK, Strother SC, Tang TB, Tiesinga P, Wachtler T, Wójcik DK, Martone ME. Abrams MB, et al. Among authors: das s. Neuroinformatics. 2022 Jan;20(1):37-38. doi: 10.1007/s12021-021-09522-x. Neuroinformatics. 2022. PMID: 33851344 Free PMC article. No abstract available.
Brainhack: Developing a culture of open, inclusive, community-driven neuroscience.
Gau R, Noble S, Heuer K, Bottenhorn KL, Bilgin IP, Yang YF, Huntenburg JM, Bayer JMM, Bethlehem RAI, Rhoads SA, Vogelbacher C, Borghesani V, Levitis E, Wang HT, Van Den Bossche S, Kobeleva X, Legarreta JH, Guay S, Atay SM, Varoquaux GP, Huijser DC, Sandström MS, Herholz P, Nastase SA, Badhwar A, Dumas G, Schwab S, Moia S, Dayan M, Bassil Y, Brooks PP, Mancini M, Shine JM, O'Connor D, Xie X, Poggiali D, Friedrich P, Heinsfeld AS, Riedl L, Toro R, Caballero-Gaudes C, Eklund A, Garner KG, Nolan CR, Demeter DV, Barrios FA, Merchant JS, McDevitt EA, Oostenveld R, Craddock RC, Rokem A, Doyle A, Ghosh SS, Nikolaidis A, Stanley OW, Uruñuela E; Brainhack Community. Gau R, et al. Neuron. 2021 Jun 2;109(11):1769-1775. doi: 10.1016/j.neuron.2021.04.001. Epub 2021 Apr 30. Neuron. 2021. PMID: 33932337 Free PMC article.
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