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Signatures of the Evolution of Parthenogenesis and Cryptobiosis in the Genomes of Panagrolaimid Nematodes.
Schiffer PH, Danchin EGJ, Burnell AM, Creevey CJ, Wong S, Dix I, O'Mahony G, Culleton BA, Rancurel C, Stier G, Martínez-Salazar EA, Marconi A, Trivedi U, Kroiher M, Thorne MAS, Schierenberg E, Wiehe T, Blaxter M. Schiffer PH, et al. Among authors: danchin egj. iScience. 2019 Nov 22;21:587-602. doi: 10.1016/j.isci.2019.10.039. Epub 2019 Oct 24. iScience. 2019. PMID: 31759330 Free PMC article.
The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence.
Eves-van den Akker S, Laetsch DR, Thorpe P, Lilley CJ, Danchin EG, Da Rocha M, Rancurel C, Holroyd NE, Cotton JA, Szitenberg A, Grenier E, Montarry J, Mimee B, Duceppe MO, Boyes I, Marvin JM, Jones LM, Yusup HB, Lafond-Lapalme J, Esquibet M, Sabeh M, Rott M, Overmars H, Finkers-Tomczak A, Smant G, Koutsovoulos G, Blok V, Mantelin S, Cock PJ, Phillips W, Henrissat B, Urwin PE, Blaxter M, Jones JT. Eves-van den Akker S, et al. Genome Biol. 2016 Jun 10;17(1):124. doi: 10.1186/s13059-016-0985-1. Genome Biol. 2016. PMID: 27286965 Free PMC article.
Hybridization and polyploidy enable genomic plasticity without sex in the most devastating plant-parasitic nematodes.
Blanc-Mathieu R, Perfus-Barbeoch L, Aury JM, Da Rocha M, Gouzy J, Sallet E, Martin-Jimenez C, Bailly-Bechet M, Castagnone-Sereno P, Flot JF, Kozlowski DK, Cazareth J, Couloux A, Da Silva C, Guy J, Kim-Jo YJ, Rancurel C, Schiex T, Abad P, Wincker P, Danchin EGJ. Blanc-Mathieu R, et al. Among authors: danchin egj. PLoS Genet. 2017 Jun 8;13(6):e1006777. doi: 10.1371/journal.pgen.1006777. eCollection 2017 Jun. PLoS Genet. 2017. PMID: 28594822 Free PMC article.
The Transcriptomes of Xiphinema index and Longidorus elongatus Suggest Independent Acquisition of Some Plant Parasitism Genes by Horizontal Gene Transfer in Early-Branching Nematodes.
Danchin EGJ, Perfus-Barbeoch L, Rancurel C, Thorpe P, Da Rocha M, Bajew S, Neilson R, Guzeeva ES, Da Silva C, Guy J, Labadie K, Esmenjaud D, Helder J, Jones JT, den Akker SE. Danchin EGJ, et al. Genes (Basel). 2017 Oct 23;8(10):287. doi: 10.3390/genes8100287. Genes (Basel). 2017. PMID: 29065523 Free PMC article.
Genome sequence of the root-knot nematode Meloidogyne luci.
Susič N, Koutsovoulos GD, Riccio C, Danchin EGJ, Blaxter ML, Lunt DH, Strajnar P, Širca S, Urek G, Stare BG. Susič N, et al. Among authors: danchin egj. J Nematol. 2020;52:1-5. doi: 10.21307/jofnem-2020-025. J Nematol. 2020. PMID: 32180388 Free PMC article.
Improvement of eukaryotic protein predictions from soil metagenomes.
Belliardo C, Koutsovoulos GD, Rancurel C, Clément M, Lipuma J, Bailly-Bechet M, Danchin EGJ. Belliardo C, et al. Among authors: danchin egj. Sci Data. 2022 Jun 16;9(1):311. doi: 10.1038/s41597-022-01420-4. Sci Data. 2022. PMID: 35710557 Free PMC article.
90 results