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PyLink: a PyMOL plugin to identify links.
Gierut AM, Dabrowski-Tumanski P, Niemyska W, Millett KC, Sulkowska JI. Gierut AM, et al. Among authors: dabrowski tumanski p. Bioinformatics. 2019 Sep 1;35(17):3166-3168. doi: 10.1093/bioinformatics/bty1038. Bioinformatics. 2019. PMID: 30649182
LassoProt: server to analyze biopolymers with lassos.
Dabrowski-Tumanski P, Niemyska W, Pasznik P, Sulkowska JI. Dabrowski-Tumanski P, et al. Nucleic Acids Res. 2016 Jul 8;44(W1):W383-9. doi: 10.1093/nar/gkw308. Epub 2016 Apr 29. Nucleic Acids Res. 2016. PMID: 27131383 Free PMC article.
LinkProt: a database collecting information about biological links.
Dabrowski-Tumanski P, Jarmolinska AI, Niemyska W, Rawdon EJ, Millett KC, Sulkowska JI. Dabrowski-Tumanski P, et al. Nucleic Acids Res. 2017 Jan 4;45(D1):D243-D249. doi: 10.1093/nar/gkw976. Epub 2016 Oct 28. Nucleic Acids Res. 2017. PMID: 27794552 Free PMC article.
In Search of Functional Advantages of Knots in Proteins.
Dabrowski-Tumanski P, Stasiak A, Sulkowska JI. Dabrowski-Tumanski P, et al. PLoS One. 2016 Nov 2;11(11):e0165986. doi: 10.1371/journal.pone.0165986. eCollection 2016. PLoS One. 2016. PMID: 27806097 Free PMC article.
Complex lasso: new entangled motifs in proteins.
Niemyska W, Dabrowski-Tumanski P, Kadlof M, Haglund E, Sułkowski P, Sulkowska JI. Niemyska W, et al. Sci Rep. 2016 Nov 22;6:36895. doi: 10.1038/srep36895. Sci Rep. 2016. PMID: 27874096 Free PMC article.
Topological knots and links in proteins.
Dabrowski-Tumanski P, Sulkowska JI. Dabrowski-Tumanski P, et al. Proc Natl Acad Sci U S A. 2017 Mar 28;114(13):3415-3420. doi: 10.1073/pnas.1615862114. Epub 2017 Mar 9. Proc Natl Acad Sci U S A. 2017. PMID: 28280100 Free PMC article.
PyLasso: a PyMOL plugin to identify lassos.
Gierut AM, Niemyska W, Dabrowski-Tumanski P, Sulkowski P, Sulkowska JI. Gierut AM, et al. Bioinformatics. 2017 Dec 1;33(23):3819-3821. doi: 10.1093/bioinformatics/btx493. Bioinformatics. 2017. PMID: 28961868
19 results