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Genotype-free demultiplexing of pooled single-cell RNA-seq.
Xu J, Falconer C, Nguyen Q, Crawford J, McKinnon BD, Mortlock S, Senabouth A, Andersen S, Chiu HS, Jiang L, Palpant NJ, Yang J, Mueller MD, Hewitt AW, Pébay A, Montgomery GW, Powell JE, Coin LJM. Xu J, et al. Among authors: crawford j. Genome Biol. 2019 Dec 19;20(1):290. doi: 10.1186/s13059-019-1852-7. Genome Biol. 2019. PMID: 31856883 Free PMC article.
Genome-wide discovery of human splicing branchpoints.
Mercer TR, Clark MB, Andersen SB, Brunck ME, Haerty W, Crawford J, Taft RJ, Nielsen LK, Dinger ME, Mattick JS. Mercer TR, et al. Among authors: crawford j. Genome Res. 2015 Feb;25(2):290-303. doi: 10.1101/gr.182899.114. Epub 2015 Jan 5. Genome Res. 2015. PMID: 25561518 Free PMC article.
Intergenic disease-associated regions are abundant in novel transcripts.
Bartonicek N, Clark MB, Quek XC, Torpy JR, Pritchard AL, Maag JLV, Gloss BS, Crawford J, Taft RJ, Hayward NK, Montgomery GW, Mattick JS, Mercer TR, Dinger ME. Bartonicek N, et al. Among authors: crawford j. Genome Biol. 2017 Dec 28;18(1):241. doi: 10.1186/s13059-017-1363-3. Genome Biol. 2017. PMID: 29284497 Free PMC article.
Spatially Resolved Transcriptomes of Mammalian Kidneys Illustrate the Molecular Complexity and Interactions of Functional Nephron Segments.
Raghubar AM, Pham DT, Tan X, Grice LF, Crawford J, Lam PY, Andersen SB, Yoon S, Teoh SM, Matigian NA, Stewart A, Francis L, Ng MSY, Healy HG, Combes AN, Kassianos AJ, Nguyen Q, Mallett AJ. Raghubar AM, et al. Among authors: crawford j. Front Med (Lausanne). 2022 Jul 7;9:873923. doi: 10.3389/fmed.2022.873923. eCollection 2022. Front Med (Lausanne). 2022. PMID: 35872784 Free PMC article.
Improved definition of the mouse transcriptome via targeted RNA sequencing.
Bussotti G, Leonardi T, Clark MB, Mercer TR, Crawford J, Malquori L, Notredame C, Dinger ME, Mattick JS, Enright AJ. Bussotti G, et al. Among authors: crawford j. Genome Res. 2016 May;26(5):705-16. doi: 10.1101/gr.199760.115. Genome Res. 2016. PMID: 27197243 Free PMC article.
Universal Alternative Splicing of Noncoding Exons.
Deveson IW, Brunck ME, Blackburn J, Tseng E, Hon T, Clark TA, Clark MB, Crawford J, Dinger ME, Nielsen LK, Mattick JS, Mercer TR. Deveson IW, et al. Among authors: crawford j. Cell Syst. 2018 Feb 28;6(2):245-255.e5. doi: 10.1016/j.cels.2017.12.005. Epub 2018 Jan 24. Cell Syst. 2018. PMID: 29396323 Free article.
The human mitochondrial transcriptome.
Mercer TR, Neph S, Dinger ME, Crawford J, Smith MA, Shearwood AM, Haugen E, Bracken CP, Rackham O, Stamatoyannopoulos JA, Filipovska A, Mattick JS. Mercer TR, et al. Among authors: crawford j. Cell. 2011 Aug 19;146(4):645-58. doi: 10.1016/j.cell.2011.06.051. Cell. 2011. PMID: 21854988 Free PMC article.
3,624 results