Coste F - Search Results

1

Predicting enzymatic function of protein sequences with attention.

Buton N, Coste F, Le Cunff Y. Buton N, et al. Among authors: coste f. Bioinformatics. 2023 Oct 3;39(10):btad620. doi: 10.1093/bioinformatics/btad620. Bioinformatics. 2023. PMID: 37874958 Free PMC article.

2

VIRALpro: a tool to identify viral capsid and tail sequences.

Galiez C, Magnan CN, Coste F, Baldi P. Galiez C, et al. Among authors: coste f. Bioinformatics. 2016 May 1;32(9):1405-7. doi: 10.1093/bioinformatics/btv727. Epub 2016 Jan 5. Bioinformatics. 2016. PMID: 26733451 Free PMC article.

3

PPalign: optimal alignment of Potts models representing proteins with direct coupling information.

Talibart H, Coste F. Talibart H, et al. Among authors: coste f. BMC Bioinformatics. 2021 Jun 10;22(1):317. doi: 10.1186/s12859-021-04222-4. BMC Bioinformatics. 2021. PMID: 34112081 Free PMC article.

4

Amplitude spectrum distance: measuring the global shape divergence of protein fragments.

Galiez C, Coste F. Galiez C, et al. Among authors: coste f. BMC Bioinformatics. 2015 Aug 14;16:256. doi: 10.1186/s12859-015-0693-y. BMC Bioinformatics. 2015. PMID: 26268224 Free PMC article.

5

Phylogenetic inference of the emergence of sequence modules and protein-protein interactions in the ADAMTS-TSL family.

Dennler O, Coste F, Blanquart S, Belleannée C, Théret N. Dennler O, et al. Among authors: coste f. PLoS Comput Biol. 2023 Aug 31;19(8):e1011404. doi: 10.1371/journal.pcbi.1011404. eCollection 2023 Aug. PLoS Comput Biol. 2023. PMID: 37651409 Free PMC article.

6

Estimating probabilistic context-free grammars for proteins using contact map constraints.

Dyrka W, Pyzik M, Coste F, Talibart H. Dyrka W, et al. Among authors: coste f. PeerJ. 2019 Mar 18;7:e6559. doi: 10.7717/peerj.6559. eCollection 2019. PeerJ. 2019. PMID: 30918754 Free PMC article.

7

Extracellular vesicles produced by human and animal Staphylococcus aureus strains share a highly conserved core proteome.

Tartaglia NR, Nicolas A, Rodovalho VR, Luz BSRD, Briard-Bion V, Krupova Z, Thierry A, Coste F, Burel A, Martin P, Jardin J, Azevedo V, Le Loir Y, Guédon E. Tartaglia NR, et al. Among authors: coste f. Sci Rep. 2020 May 21;10(1):8467. doi: 10.1038/s41598-020-64952-y. Sci Rep. 2020. PMID: 32439871 Free PMC article.

8

CyanoLyase: a database of phycobilin lyase sequences, motifs and functions.

Bretaudeau A, Coste F, Humily F, Garczarek L, Le Corguillé G, Six C, Ratin M, Collin O, Schluchter WM, Partensky F. Bretaudeau A, et al. Among authors: coste f. Nucleic Acids Res. 2013 Jan;41(Database issue):D396-401. doi: 10.1093/nar/gks1091. Epub 2012 Nov 21. Nucleic Acids Res. 2013. PMID: 23175607 Free PMC article.

9

Mechanisms of Pulmonary Vasculopathy in Acute and Long-Term COVID-19: A Review.

Riou M, Coste F, Meyer A, Enache I, Talha S, Charloux A, Reboul C, Geny B. Riou M, et al. Among authors: coste f. Int J Mol Sci. 2024 Apr 30;25(9):4941. doi: 10.3390/ijms25094941. Int J Mol Sci. 2024. PMID: 38732160 Free PMC article. Review.

10

NGF increases Connexin-43 expression and function in pulmonary arterial smooth muscle cells to induce pulmonary artery hyperreactivity.

Cardouat G, Douard M, Bouchet C, Roubenne L, Kmecová Z, Esteves P, Brette F, Guignabert C, Tu L, Campagnac M, Robillard P, Coste F, Delcambre F, Thumerel M, Begueret H, Maurac A, Belaroussi Y, Klimas J, Ducret T, Quignard JF, Vacher P, Baudrimont I, Marthan R, Berger P, Guibert C, Freund-Michel V. Cardouat G, et al. Among authors: coste f. Biomed Pharmacother. 2024 May;174:116552. doi: 10.1016/j.biopha.2024.116552. Epub 2024 Apr 9. Biomed Pharmacother. 2024. PMID: 38599061 Free article.

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