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Ecological plant epigenetics: Evidence from model and non-model species, and the way forward.
Richards CL, Alonso C, Becker C, Bossdorf O, Bucher E, Colomé-Tatché M, Durka W, Engelhardt J, Gaspar B, Gogol-Döring A, Grosse I, van Gurp TP, Heer K, Kronholm I, Lampei C, Latzel V, Mirouze M, Opgenoorth L, Paun O, Prohaska SJ, Rensing SA, Stadler PF, Trucchi E, Ullrich K, Verhoeven KJF. Richards CL, et al. Ecol Lett. 2017 Dec;20(12):1576-1590. doi: 10.1111/ele.12858. Epub 2017 Oct 12. Ecol Lett. 2017. PMID: 29027325 Review.
Region-level epimutation rates in Arabidopsis thaliana.
Denkena J, Johannes F, Colomé-Tatché M. Denkena J, et al. Heredity (Edinb). 2021 Aug;127(2):190-202. doi: 10.1038/s41437-021-00441-w. Epub 2021 May 8. Heredity (Edinb). 2021. PMID: 33966050 Free PMC article.
Features of the Arabidopsis recombination landscape resulting from the combined loss of sequence variation and DNA methylation.
Colomé-Tatché M, Cortijo S, Wardenaar R, Morgado L, Lahouze B, Sarazin A, Etcheverry M, Martin A, Feng S, Duvernois-Berthet E, Labadie K, Wincker P, Jacobsen SE, Jansen RC, Colot V, Johannes F. Colomé-Tatché M, et al. Proc Natl Acad Sci U S A. 2012 Oct 2;109(40):16240-5. doi: 10.1073/pnas.1212955109. Epub 2012 Sep 17. Proc Natl Acad Sci U S A. 2012. PMID: 22988127 Free PMC article.
A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa.
Hofmeister BT, Denkena J, Colomé-Tatché M, Shahryary Y, Hazarika R, Grimwood J, Mamidi S, Jenkins J, Grabowski PP, Sreedasyam A, Shu S, Barry K, Lail K, Adam C, Lipzen A, Sorek R, Kudrna D, Talag J, Wing R, Hall DW, Jacobsen D, Tuskan GA, Schmutz J, Johannes F, Schmitz RJ. Hofmeister BT, et al. Genome Biol. 2020 Oct 6;21(1):259. doi: 10.1186/s13059-020-02162-5. Genome Biol. 2020. PMID: 33023654 Free PMC article.
Rate, spectrum, and evolutionary dynamics of spontaneous epimutations.
van der Graaf A, Wardenaar R, Neumann DA, Taudt A, Shaw RG, Jansen RC, Schmitz RJ, Colomé-Tatché M, Johannes F. van der Graaf A, et al. Proc Natl Acad Sci U S A. 2015 May 26;112(21):6676-81. doi: 10.1073/pnas.1424254112. Epub 2015 May 11. Proc Natl Acad Sci U S A. 2015. PMID: 25964364 Free PMC article.
Genetic sources of population epigenomic variation.
Taudt A, Colomé-Tatché M, Johannes F. Taudt A, et al. Nat Rev Genet. 2016 Jun;17(6):319-32. doi: 10.1038/nrg.2016.45. Epub 2016 May 9. Nat Rev Genet. 2016. PMID: 27156976 Review.
47 results