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Page 1
High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460.
Matrosova VY, Gaidamakova EK, Makarova KS, Grichenko O, Klimenkova P, Volpe RP, Tkavc R, Ertem G, Conze IH, Brambilla E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy T, Daum C, Shapiro N, Ivanova N, Kyrpides N, Woyke T, Daligault H, Davenport K, Erkkila T, Goodwin LA, Gu W, Munk C, Teshima H, Xu Y, Chain P, Woolbert M, Gunde-Cimerman N, Wolf YI, Grebenc T, Gostinčar C, Daly MJ. Matrosova VY, et al. Among authors: clum a. Stand Genomic Sci. 2017 Jul 28;12:46. doi: 10.1186/s40793-017-0258-y. eCollection 2017. Stand Genomic Sci. 2017. PMID: 28775794 Free PMC article.
One bacterial cell, one complete genome.
Woyke T, Tighe D, Mavromatis K, Clum A, Copeland A, Schackwitz W, Lapidus A, Wu D, McCutcheon JP, McDonald BR, Moran NA, Bristow J, Cheng JF. Woyke T, et al. Among authors: clum a. PLoS One. 2010 Apr 23;5(4):e10314. doi: 10.1371/journal.pone.0010314. PLoS One. 2010. PMID: 20428247 Free PMC article.
Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP).
Clum A, Nolan M, Lang E, Glavina Del Rio T, Tice H, Copeland A, Cheng JF, Lucas S, Chen F, Bruce D, Goodwin L, Pitluck S, Ivanova N, Mavrommatis K, Mikhailova N, Pati A, Chen A, Palaniappan K, Göker M, Spring S, Land M, Hauser L, Chang YJ, Jeffries CC, Chain P, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Lapidus A. Clum A, et al. Stand Genomic Sci. 2009 Jul 20;1(1):38-45. doi: 10.4056/sigs.1463. Stand Genomic Sci. 2009. PMID: 21304635 Free PMC article.
Complete genome sequence of Pirellula staleyi type strain (ATCC 27377).
Clum A, Tindall BJ, Sikorski J, Ivanova N, Mavrommatis K, Lucas S, Glavina T, Del Rio, Nolan M, Chen F, Tice H, Pitluck S, Cheng JF, Chertkov O, Brettin T, Han C, Detter JC, Kuske C, Bruce D, Goodwin L, Ovchinikova G, Pati A, Mikhailova N, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Chain P, Rohde M, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Lapidus A. Clum A, et al. Stand Genomic Sci. 2009 Dec 30;1(3):308-16. doi: 10.4056/sigs.51657. Stand Genomic Sci. 2009. PMID: 21304671 Free PMC article.
Complete genome sequence of Cellulomonas flavigena type strain (134).
Abt B, Foster B, Lapidus A, Clum A, Sun H, Pukall R, Lucas S, Glavina Del Rio T, Nolan M, Tice H, Cheng JF, Pitluck S, Liolios K, Ivanova N, Mavromatis K, Ovchinnikova G, Pati A, Goodwin L, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Rohde M, Göker M, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP. Abt B, et al. Among authors: clum a. Stand Genomic Sci. 2010 Jul 29;3(1):15-25. doi: 10.4056/sigs.1012662. Stand Genomic Sci. 2010. PMID: 21304688 Free PMC article.
Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207).
Labutti K, Mayilraj S, Clum A, Lucas S, Glavina Del Rio T, Nolan M, Tice H, Cheng JF, Pitluck S, Liolios K, Ivanova N, Mavromatis K, Mikhailova N, Pati A, Goodwin L, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Rohde M, Spring S, Göker M, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Lapidus A. Labutti K, et al. Among authors: clum a. Stand Genomic Sci. 2010 Aug 20;3(1):85-92. doi: 10.4056/sigs.1092865. Stand Genomic Sci. 2010. PMID: 21304695 Free PMC article.
Erratum to: Complete genome sequence of Pirellula staleyi type strain (ATCC 27377).
Clum A, Tindall BJ, Sikorski J, Ivanova N, Mavromatis K, Lucas S, Glavina Del Rio T, Nolan M, Chen F, Tice H, Pitluck S, Cheng JF, Chertkov O, Brettin T, Han C, Detter JC, Kuske C, Bruce D, Goodwin L, Ovchinikova G, Pati A, Mikhailova N, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Chain P, Rohde M, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Lapidus A. Clum A, et al. Stand Genomic Sci. 2010 May 15;2(2):228-88. doi: 10.4056/sigs.881234. Stand Genomic Sci. 2010. PMID: 21304706 Free PMC article. No abstract available.
Complete genome sequence of "Thioalkalivibrio sulfidophilus" HL-EbGr7.
Muyzer G, Sorokin DY, Mavromatis K, Lapidus A, Clum A, Ivanova N, Pati A, d'Haeseleer P, Woyke T, Kyrpides NC. Muyzer G, et al. Among authors: clum a. Stand Genomic Sci. 2011 Feb 14;4(1):23-35. doi: 10.4056/sigs.1483693. Stand Genomic Sci. 2011. PMID: 21475584 Free PMC article.
Genomes of three methylotrophs from a single niche reveal the genetic and metabolic divergence of the methylophilaceae.
Lapidus A, Clum A, Labutti K, Kaluzhnaya MG, Lim S, Beck DA, Glavina Del Rio T, Nolan M, Mavromatis K, Huntemann M, Lucas S, Lidstrom ME, Ivanova N, Chistoserdova L. Lapidus A, et al. Among authors: clum a. J Bacteriol. 2011 Aug;193(15):3757-64. doi: 10.1128/JB.00404-11. Epub 2011 May 27. J Bacteriol. 2011. PMID: 21622745 Free PMC article.
Complete genome sequence of Arthrobacter phenanthrenivorans type strain (Sphe3).
Kallimanis A, Labutti KM, Lapidus A, Clum A, Lykidis A, Mavromatis K, Pagani I, Liolios K, Ivanova N, Goodwin L, Pitluck S, Chen A, Palaniappan K, Markowitz V, Bristow J, Velentzas AD, Perisynakis A, Ouzounis CC, Kyrpides NC, Koukkou AI, Drainas C. Kallimanis A, et al. Among authors: clum a. Stand Genomic Sci. 2011 Apr 29;4(2):123-30. doi: 10.4056/sigs.1393494. Stand Genomic Sci. 2011. PMID: 21677849 Free PMC article.
113 results