Claros MG - Search Results

1

Normalized Workflow to Optimize Hybrid De Novo Transcriptome Assembly for Non-Model Species: A Case Study in Lilium ledebourii (Baker) Boiss.

Sheikh-Assadi M, Naderi R, Salami SA, Kafi M, Fatahi R, Shariati V, Martinelli F, Cicatelli A, Triassi M, Guarino F, Improta G, Claros MG. Sheikh-Assadi M, et al. Among authors: claros mg. Plants (Basel). 2022 Sep 10;11(18):2365. doi: 10.3390/plants11182365. Plants (Basel). 2022. PMID: 36145766 Free PMC article.

2

OliveAtlas: A Gene Expression Atlas Tool for Olea europaea.

Bullones A, Castro AJ, Lima-Cabello E, Alché JD, Luque F, Claros MG, Fernandez-Pozo N. Bullones A, et al. Among authors: claros mg. Plants (Basel). 2023 Mar 10;12(6):1274. doi: 10.3390/plants12061274. Plants (Basel). 2023. PMID: 36986964 Free PMC article.

3

Transcriptomic Insight into the Pollen Tube Growth of Olea europaea L. subsp. europaea Reveals Reprogramming and Pollen-Specific Genes Including New Transcription Factors.

Bullones A, Castro AJ, Lima-Cabello E, Fernandez-Pozo N, Bautista R, Alché JD, Claros MG. Bullones A, et al. Among authors: claros mg. Plants (Basel). 2023 Aug 8;12(16):2894. doi: 10.3390/plants12162894. Plants (Basel). 2023. PMID: 37631106 Free PMC article.

4

TransFlow: a modular framework for assembling and assessing accurate de novo transcriptomes in non-model organisms.

Seoane P, Espigares M, Carmona R, Polonio Á, Quintana J, Cretazzo E, Bota J, Pérez-García A, Dios Alché J, Gómez L, Claros MG. Seoane P, et al. Among authors: claros mg. BMC Bioinformatics. 2018 Nov 20;19(Suppl 14):416. doi: 10.1186/s12859-018-2384-y. BMC Bioinformatics. 2018. PMID: 30453874 Free PMC article.

5

De novo assembly and functional annotation of Citrus aurantifolia transcriptome from Candidatus Liberibacter asiaticus infected and non-infected trees.

Arce-Leal ÁP, Bautista R, Rodríguez-Negrete EA, Manzanilla-Ramírez MÁ, Velázquez-Monreal JJ, Méndez-Lozano J, Bejarano ER, Castillo AG, Claros MG, Leyva-López NE. Arce-Leal ÁP, et al. Among authors: claros mg. Data Brief. 2020 Jan 25;29:105198. doi: 10.1016/j.dib.2020.105198. eCollection 2020 Apr. Data Brief. 2020. PMID: 32071978 Free PMC article.

6

An improved de novo assembling and polishing of Solea senegalensis transcriptome shed light on retinoic acid signalling in larvae.

Córdoba-Caballero J, Seoane P, Jabato FM, Perkins JR, Manchado M, Claros MG. Córdoba-Caballero J, et al. Among authors: claros mg. Sci Rep. 2020 Nov 26;10(1):20654. doi: 10.1038/s41598-020-77201-z. Sci Rep. 2020. PMID: 33244091 Free PMC article.

7

SeqTrim: a high-throughput pipeline for pre-processing any type of sequence read.

Falgueras J, Lara AJ, Fernández-Pozo N, Cantón FR, Pérez-Trabado G, Claros MG. Falgueras J, et al. Among authors: claros mg. BMC Bioinformatics. 2010 Jan 20;11:38. doi: 10.1186/1471-2105-11-38. BMC Bioinformatics. 2010. PMID: 20089148 Free PMC article.

8

AlignMiner: a Web-based tool for detection of divergent regions in multiple sequence alignments of conserved sequences.

Guerrero D, Bautista R, Villalobos DP, Cantón FR, Claros MG. Guerrero D, et al. Among authors: claros mg. Algorithms Mol Biol. 2010 Jun 2;5:24. doi: 10.1186/1748-7188-5-24. Algorithms Mol Biol. 2010. PMID: 20525162 Free PMC article.

9

Pyroptosis and adaptive immunity mechanisms are promptly engendered in mesenteric lymph-nodes during pig infections with Salmonella enterica serovar Typhimurium.

Martins RP, Aguilar C, Graham JE, Carvajal A, Bautista R, Claros MG, Garrido JJ. Martins RP, et al. Among authors: claros mg. Vet Res. 2013 Dec 5;44(1):120. doi: 10.1186/1297-9716-44-120. Vet Res. 2013. PMID: 24308825 Free PMC article.

10

Why assembling plant genome sequences is so challenging.

Claros MG, Bautista R, Guerrero-Fernández D, Benzerki H, Seoane P, Fernández-Pozo N. Claros MG, et al. Biology (Basel). 2012 Sep 18;1(2):439-59. doi: 10.3390/biology1020439. Biology (Basel). 2012. PMID: 24832233 Free PMC article.

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