Claassen M - Search Results

1

Novel Blood Vascular Endothelial Subtype-Specific Markers in Human Skin Unearthed by Single-Cell Transcriptomic Profiling.

He Y, Tacconi C, Dieterich LC, Kim J, Restivo G, Gousopoulos E, Lindenblatt N, Levesque MP, Claassen M, Detmar M. He Y, et al. Among authors: claassen m. Cells. 2022 Mar 25;11(7):1111. doi: 10.3390/cells11071111. Cells. 2022. PMID: 35406678 Free PMC article.

2

Phase-specific signatures of wound fibroblasts and matrix patterns define cancer-associated fibroblast subtypes.

Wietecha MS, Lauenstein D, Cangkrama M, Seiler S, Jin J, Goppelt A, Claassen M, Levesque MP, Dummer R, Werner S. Wietecha MS, et al. Among authors: claassen m. Matrix Biol. 2023 May;119:19-56. doi: 10.1016/j.matbio.2023.03.003. Epub 2023 Mar 11. Matrix Biol. 2023. PMID: 36914141 Free article.

3

TGF-β induces oncofetal fibronectin that, in turn, modulates TGF-β superfamily signaling in endothelial cells.

Ventura E, Weller M, Macnair W, Eschbach K, Beisel C, Cordazzo C, Claassen M, Zardi L, Burghardt I. Ventura E, et al. Among authors: claassen m. J Cell Sci. 2018 Jan 9;131(1):jcs209619. doi: 10.1242/jcs.209619. J Cell Sci. 2018. PMID: 29158223 Free article.

4

psupertime: supervised pseudotime analysis for time-series single-cell RNA-seq data.

Macnair W, Gupta R, Claassen M. Macnair W, et al. Among authors: claassen m. Bioinformatics. 2022 Jun 24;38(Suppl 1):i290-i298. doi: 10.1093/bioinformatics/btac227. Bioinformatics. 2022. PMID: 35758781 Free PMC article.

5

Mixture-of-Experts Variational Autoencoder for clustering and generating from similarity-based representations on single cell data.

Kopf A, Fortuin V, Somnath VR, Claassen M. Kopf A, et al. Among authors: claassen m. PLoS Comput Biol. 2021 Jun 30;17(6):e1009086. doi: 10.1371/journal.pcbi.1009086. eCollection 2021 Jun. PLoS Comput Biol. 2021. PMID: 34191792 Free PMC article.

6

Visualizing hierarchies in scRNA-seq data using a density tree-biased autoencoder.

Garrido Q, Damrich S, Jäger A, Cerletti D, Claassen M, Najman L, Hamprecht FA. Garrido Q, et al. Among authors: claassen m. Bioinformatics. 2022 Jun 24;38(Suppl 1):i316-i324. doi: 10.1093/bioinformatics/btac249. Bioinformatics. 2022. PMID: 35758814 Free PMC article.

7

Epitope-Tagged Autotransporters as Single-Cell Reporters for Gene Expression by a Salmonella Typhimurium wbaP Mutant.

Curkić I, Schütz M, Oberhettinger P, Diard M, Claassen M, Linke D, Hardt WD. Curkić I, et al. Among authors: claassen m. PLoS One. 2016 May 5;11(5):e0154828. doi: 10.1371/journal.pone.0154828. eCollection 2016. PLoS One. 2016. PMID: 27149272 Free PMC article.

8

Identification of ALP+/CD73+ defining markers for enhanced osteogenic potential in human adipose-derived mesenchymal stromal cells by mass cytometry.

Canepa DD, Casanova EA, Arvaniti E, Tosevski V, Märsmann S, Eggerschwiler B, Halvachizadeh S, Buschmann J, Barth AA, Plock JA, Claassen M, Pape HC, Cinelli P. Canepa DD, et al. Among authors: claassen m. Stem Cell Res Ther. 2021 Jan 6;12(1):7. doi: 10.1186/s13287-020-02044-4. Stem Cell Res Ther. 2021. PMID: 33407847 Free PMC article.

9

Dynamics of Melanoma-Associated Epitope-Specific CD8+ T Cells in the Blood Correlate With Clinical Outcome Under PD-1 Blockade.

Gaißler A, Meldgaard TS, Heeke C, Babaei S, Tvingsholm SA, Bochem J, Spreuer J, Amaral T, Wagner NB, Klein R, Meier F, Garbe C, Eigentler TK, Pawelec G, Claassen M, Weide B, Hadrup SR, Wistuba-Hamprecht K. Gaißler A, et al. Among authors: claassen m. Front Immunol. 2022 Jul 7;13:906352. doi: 10.3389/fimmu.2022.906352. eCollection 2022. Front Immunol. 2022. PMID: 35874702 Free PMC article.

10

Deterministic scRNA-seq captures variation in intestinal crypt and organoid composition.

Bues J, Biočanin M, Pezoldt J, Dainese R, Chrisnandy A, Rezakhani S, Saelens W, Gardeux V, Gupta R, Sarkis R, Russeil J, Saeys Y, Amstad E, Claassen M, Lutolf MP, Deplancke B. Bues J, et al. Among authors: claassen m. Nat Methods. 2022 Mar;19(3):323-330. doi: 10.1038/s41592-021-01391-1. Epub 2022 Feb 14. Nat Methods. 2022. PMID: 35165449

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