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Preformed chromatin topology assists transcriptional robustness of Shh during limb development.
Paliou C, Guckelberger P, Schöpflin R, Heinrich V, Esposito A, Chiariello AM, Bianco S, Annunziatella C, Helmuth J, Haas S, Jerković I, Brieske N, Wittler L, Timmermann B, Nicodemi M, Vingron M, Mundlos S, Andrey G. Paliou C, et al. Among authors: chiariello am. Proc Natl Acad Sci U S A. 2019 Jun 18;116(25):12390-12399. doi: 10.1073/pnas.1900672116. Epub 2019 May 30. Proc Natl Acad Sci U S A. 2019. PMID: 31147463 Free PMC article.
Polymer models of chromatin organization.
Barbieri M, Scialdone A, Piccolo A, Chiariello AM, di Lanno C, Prisco A, Pombo A, Nicodemi M. Barbieri M, et al. Among authors: chiariello am. Front Genet. 2013 Jun 20;4:113. doi: 10.3389/fgene.2013.00113. eCollection 2013. Front Genet. 2013. PMID: 23802011 Free PMC article. No abstract available.
Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation.
Fraser J, Ferrai C, Chiariello AM, Schueler M, Rito T, Laudanno G, Barbieri M, Moore BL, Kraemer DC, Aitken S, Xie SQ, Morris KJ, Itoh M, Kawaji H, Jaeger I, Hayashizaki Y, Carninci P, Forrest AR; FANTOM Consortium; Semple CA, Dostie J, Pombo A, Nicodemi M. Fraser J, et al. Among authors: chiariello am. Mol Syst Biol. 2015 Dec 23;11(12):852. doi: 10.15252/msb.20156492. Mol Syst Biol. 2015. PMID: 26700852 Free PMC article.
Polymer Physics of the Large-Scale Structure of Chromatin.
Bianco S, Chiariello AM, Annunziatella C, Esposito A, Nicodemi M. Bianco S, et al. Among authors: chiariello am. Methods Mol Biol. 2016;1480:201-6. doi: 10.1007/978-1-4939-6380-5_17. Methods Mol Biol. 2016. PMID: 27659986
Predicting chromatin architecture from models of polymer physics.
Bianco S, Chiariello AM, Annunziatella C, Esposito A, Nicodemi M. Bianco S, et al. Among authors: chiariello am. Chromosome Res. 2017 Mar;25(1):25-34. doi: 10.1007/s10577-016-9545-5. Epub 2017 Jan 9. Chromosome Res. 2017. PMID: 28070687 Review.
Structure of the human chromosome interaction network.
Sarnataro S, Chiariello AM, Esposito A, Prisco A, Nicodemi M. Sarnataro S, et al. Among authors: chiariello am. PLoS One. 2017 Nov 15;12(11):e0188201. doi: 10.1371/journal.pone.0188201. eCollection 2017. PLoS One. 2017. PMID: 29141034 Free PMC article.
46 results