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The genome sequence of segmental allotetraploid peanut Arachis hypogaea.
Bertioli DJ, Jenkins J, Clevenger J, Dudchenko O, Gao D, Seijo G, Leal-Bertioli SCM, Ren L, Farmer AD, Pandey MK, Samoluk SS, Abernathy B, Agarwal G, Ballén-Taborda C, Cameron C, Campbell J, Chavarro C, Chitikineni A, Chu Y, Dash S, El Baidouri M, Guo B, Huang W, Kim KD, Korani W, Lanciano S, Lui CG, Mirouze M, Moretzsohn MC, Pham M, Shin JH, Shirasawa K, Sinharoy S, Sreedasyam A, Weeks NT, Zhang X, Zheng Z, Sun Z, Froenicke L, Aiden EL, Michelmore R, Varshney RK, Holbrook CC, Cannon EKS, Scheffler BE, Grimwood J, Ozias-Akins P, Cannon SB, Jackson SA, Schmutz J. Bertioli DJ, et al. Among authors: chavarro c. Nat Genet. 2019 May;51(5):877-884. doi: 10.1038/s41588-019-0405-z. Epub 2019 May 1. Nat Genet. 2019. PMID: 31043755
A reference genome for common bean and genome-wide analysis of dual domestications.
Schmutz J, McClean PE, Mamidi S, Wu GA, Cannon SB, Grimwood J, Jenkins J, Shu S, Song Q, Chavarro C, Torres-Torres M, Geffroy V, Moghaddam SM, Gao D, Abernathy B, Barry K, Blair M, Brick MA, Chovatia M, Gepts P, Goodstein DM, Gonzales M, Hellsten U, Hyten DL, Jia G, Kelly JD, Kudrna D, Lee R, Richard MM, Miklas PN, Osorno JM, Rodrigues J, Thareau V, Urrea CA, Wang M, Yu Y, Zhang M, Wing RA, Cregan PB, Rokhsar DS, Jackson SA. Schmutz J, et al. Among authors: chavarro c. Nat Genet. 2014 Jul;46(7):707-13. doi: 10.1038/ng.3008. Epub 2014 Jun 8. Nat Genet. 2014. PMID: 24908249 Free PMC article.
Tetrasomic recombination is surprisingly frequent in allotetraploid Arachis.
Leal-Bertioli S, Shirasawa K, Abernathy B, Moretzsohn M, Chavarro C, Clevenger J, Ozias-Akins P, Jackson S, Bertioli D. Leal-Bertioli S, et al. Among authors: chavarro c. Genetics. 2015 Apr;199(4):1093-105. doi: 10.1534/genetics.115.174607. Epub 2015 Feb 20. Genetics. 2015. PMID: 25701284 Free PMC article.
Genome-wide SNP Genotyping Resolves Signatures of Selection and Tetrasomic Recombination in Peanut.
Clevenger J, Chu Y, Chavarro C, Agarwal G, Bertioli DJ, Leal-Bertioli SCM, Pandey MK, Vaughn J, Abernathy B, Barkley NA, Hovav R, Burow M, Nayak SN, Chitikineni A, Isleib TG, Holbrook CC, Jackson SA, Varshney RK, Ozias-Akins P. Clevenger J, et al. Among authors: chavarro c. Mol Plant. 2017 Feb 13;10(2):309-322. doi: 10.1016/j.molp.2016.11.015. Epub 2016 Dec 18. Mol Plant. 2017. PMID: 27993622 Free PMC article.
Development and Evaluation of a High Density Genotyping 'Axiom_Arachis' Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut.
Pandey MK, Agarwal G, Kale SM, Clevenger J, Nayak SN, Sriswathi M, Chitikineni A, Chavarro C, Chen X, Upadhyaya HD, Vishwakarma MK, Leal-Bertioli S, Liang X, Bertioli DJ, Guo B, Jackson SA, Ozias-Akins P, Varshney RK. Pandey MK, et al. Among authors: chavarro c. Sci Rep. 2017 Jan 16;7:40577. doi: 10.1038/srep40577. Sci Rep. 2017. PMID: 28091575 Free PMC article.
Legacy genetics of Arachis cardenasii in the peanut crop shows the profound benefits of international seed exchange.
Bertioli DJ, Clevenger J, Godoy IJ, Stalker HT, Wood S, Santos JF, Ballén-Taborda C, Abernathy B, Azevedo V, Campbell J, Chavarro C, Chu Y, Farmer AD, Fonceka D, Gao D, Grimwood J, Halpin N, Korani W, Michelotto MD, Ozias-Akins P, Vaughn J, Youngblood R, Moretzsohn MC, Wright GC, Jackson SA, Cannon SB, Scheffler BE, Leal-Bertioli SCM. Bertioli DJ, et al. Among authors: chavarro c. Proc Natl Acad Sci U S A. 2021 Sep 21;118(38):e2104899118. doi: 10.1073/pnas.2104899118. Proc Natl Acad Sci U S A. 2021. PMID: 34518223 Free PMC article.
22 results