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HIV-1 and SARS-CoV-2: Patterns in the evolution of two pandemic pathogens.
Fischer W, Giorgi EE, Chakraborty S, Nguyen K, Bhattacharya T, Theiler J, Goloboff PA, Yoon H, Abfalterer W, Foley BT, Tegally H, San JE, de Oliveira T; Network for Genomic Surveillance in South Africa (NGS-SA); Gnanakaran S, Korber B. Fischer W, et al. Among authors: chakraborty s. Cell Host Microbe. 2021 Jul 14;29(7):1093-1110. doi: 10.1016/j.chom.2021.05.012. Epub 2021 Jun 3. Cell Host Microbe. 2021. PMID: 34242582 Free PMC article. Review.
The SARS-CoV-2 Spike Variant D614G Favors an Open Conformational State.
Mansbach RA, Chakraborty S, Nguyen K, Montefiori D, Korber B, Gnanakaran S. Mansbach RA, et al. Among authors: chakraborty s. bioRxiv [Preprint]. 2020 Jul 26:2020.07.26.219741. doi: 10.1101/2020.07.26.219741. bioRxiv. 2020. PMID: 32743581 Free PMC article. Updated. Preprint.
Visualization of the HIV-1 Env glycan shield across scales.
Berndsen ZT, Chakraborty S, Wang X, Cottrell CA, Torres JL, Diedrich JK, López CA, Yates JR 3rd, van Gils MJ, Paulson JC, Gnanakaran S, Ward AB. Berndsen ZT, et al. Among authors: chakraborty s. Proc Natl Acad Sci U S A. 2020 Nov 10;117(45):28014-28025. doi: 10.1073/pnas.2000260117. Epub 2020 Oct 22. Proc Natl Acad Sci U S A. 2020. PMID: 33093196 Free PMC article.
The SARS-CoV-2 Spike variant D614G favors an open conformational state.
Mansbach RA, Chakraborty S, Nguyen K, Montefiori DC, Korber B, Gnanakaran S. Mansbach RA, et al. Among authors: chakraborty s. Sci Adv. 2021 Apr 16;7(16):eabf3671. doi: 10.1126/sciadv.abf3671. Print 2021 Apr. Sci Adv. 2021. PMID: 33863729 Free PMC article.
A neutralizing antibody target in early HIV-1 infection was recapitulated in rhesus macaques immunized with the transmitted/founder envelope sequence.
Welbourn S, Chakraborty S, Yang JE, Gleinich AS, Gangadhara S, Khan S, Ferrebee C, Yagnik B, Burton S, Charles T, Smith SA, Williams D, Mopuri R, Upadhyay AA, Thompson J, Price MA, Wang S, Qin Z, Shen X, Williams LD, Eisel N, Peters T, Zhang L, Kilembe W, Karita E, Tomaras GD, Bosinger SE, Amara RR, Azadi P, Wright ER, Gnanakaran S, Derdeyn CA. Welbourn S, et al. Among authors: chakraborty s. PLoS Pathog. 2022 May 3;18(5):e1010488. doi: 10.1371/journal.ppat.1010488. eCollection 2022 May. PLoS Pathog. 2022. PMID: 35503780 Free PMC article.
4,236 results