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The RNA-binding protein ILF3 binds to transposable element sequences in SINEUP lncRNAs.
Fasolo F, Patrucco L, Volpe M, Bon C, Peano C, Mignone F, Carninci P, Persichetti F, Santoro C, Zucchelli S, Sblattero D, Sanges R, Cotella D, Gustincich S. Fasolo F, et al. Among authors: carninci p. FASEB J. 2019 Dec;33(12):13572-13589. doi: 10.1096/fj.201901618RR. Epub 2019 Oct 25. FASEB J. 2019. PMID: 31570000 Free PMC article.
., Patrucco, L., Volpe, M., Bon, C., Peano, C., Mignone, F., Carninci, P., Persichetti, F., Santoro, C., Zucchelli, S., Sblattero, D., Sanges, R., Cotella, D., Gustincich, S. ...
., Patrucco, L., Volpe, M., Bon, C., Peano, C., Mignone, F., Carninci, P., Persichetti, F., Santoro, C., Zucchelli, S., Sblatt …
Genome-wide analysis of mammalian promoter architecture and evolution.
Carninci P, Sandelin A, Lenhard B, Katayama S, Shimokawa K, Ponjavic J, Semple CA, Taylor MS, Engström PG, Frith MC, Forrest AR, Alkema WB, Tan SL, Plessy C, Kodzius R, Ravasi T, Kasukawa T, Fukuda S, Kanamori-Katayama M, Kitazume Y, Kawaji H, Kai C, Nakamura M, Konno H, Nakano K, Mottagui-Tabar S, Arner P, Chesi A, Gustincich S, Persichetti F, Suzuki H, Grimmond SM, Wells CA, Orlando V, Wahlestedt C, Liu ET, Harbers M, Kawai J, Bajic VB, Hume DA, Hayashizaki Y. Carninci P, et al. Nat Genet. 2006 Jun;38(6):626-35. doi: 10.1038/ng1789. Epub 2006 Apr 28. Nat Genet. 2006. PMID: 16645617
The complexity of the mammalian transcriptome.
Gustincich S, Sandelin A, Plessy C, Katayama S, Simone R, Lazarevic D, Hayashizaki Y, Carninci P. Gustincich S, et al. Among authors: carninci p. J Physiol. 2006 Sep 1;575(Pt 2):321-32. doi: 10.1113/jphysiol.2006.115568. Epub 2006 Jul 20. J Physiol. 2006. PMID: 16857706 Free PMC article. Review.
Discrimination of non-protein-coding transcripts from protein-coding mRNA.
Frith MC, Bailey TL, Kasukawa T, Mignone F, Kummerfeld SK, Madera M, Sunkara S, Furuno M, Bult CJ, Quackenbush J, Kai C, Kawai J, Carninci P, Hayashizaki Y, Pesole G, Mattick JS. Frith MC, et al. Among authors: carninci p. RNA Biol. 2006 Jan-Mar;3(1):40-8. doi: 10.4161/rna.3.1.2789. Epub 2006 Apr 3. RNA Biol. 2006. PMID: 17114936
Promoter architecture of mouse olfactory receptor genes.
Plessy C, Pascarella G, Bertin N, Akalin A, Carrieri C, Vassalli A, Lazarevic D, Severin J, Vlachouli C, Simone R, Faulkner GJ, Kawai J, Daub CO, Zucchelli S, Hayashizaki Y, Mombaerts P, Lenhard B, Gustincich S, Carninci P. Plessy C, et al. Among authors: carninci p. Genome Res. 2012 Mar;22(3):486-97. doi: 10.1101/gr.126201.111. Epub 2011 Dec 22. Genome Res. 2012. PMID: 22194471 Free PMC article.
NanoCAGE analysis of the mouse olfactory epithelium identifies the expression of vomeronasal receptors and of proximal LINE elements.
Pascarella G, Lazarevic D, Plessy C, Bertin N, Akalin A, Vlachouli C, Simone R, Faulkner GJ, Zucchelli S, Kawai J, Daub CO, Hayashizaki Y, Lenhard B, Carninci P, Gustincich S. Pascarella G, et al. Among authors: carninci p. Front Cell Neurosci. 2014 Feb 18;8:41. doi: 10.3389/fncel.2014.00041. eCollection 2014. Front Cell Neurosci. 2014. PMID: 24600346 Free PMC article.
Mesencephalic dopaminergic neurons express a repertoire of olfactory receptors and respond to odorant-like molecules.
Grison A, Zucchelli S, Urzì A, Zamparo I, Lazarevic D, Pascarella G, Roncaglia P, Giorgetti A, Garcia-Esparcia P, Vlachouli C, Simone R, Persichetti F, Forrest AR, Hayashizaki Y, Carloni P, Ferrer I, Lodovichi C, Plessy C; FANTOM Consortium; Carninci P, Gustincich S. Grison A, et al. Among authors: carninci p. BMC Genomics. 2014 Aug 27;15(1):729. doi: 10.1186/1471-2164-15-729. BMC Genomics. 2014. PMID: 25164183 Free PMC article.
396 results