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SCOPE: a web server for practical de novo motif discovery.
Carlson JM, Chakravarty A, DeZiel CE, Gross RH. Carlson JM, et al. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W259-64. doi: 10.1093/nar/gkm310. Epub 2007 May 7. Nucleic Acids Res. 2007. PMID: 17485471 Free PMC article.
Amino-acid co-variation in HIV-1 Gag subtype C: HLA-mediated selection pressure and compensatory dynamics.
Rolland M, Carlson JM, Manocheewa S, Swain JV, Lanxon-Cookson E, Deng W, Rousseau CM, Raugi DN, Learn GH, Maust BS, Coovadia H, Ndung'u T, Goulder PJ, Walker BD, Brander C, Heckerman DE, Mullins JI. Rolland M, et al. Among authors: carlson jm. PLoS One. 2010 Sep 1;5(9):e12463. doi: 10.1371/journal.pone.0012463. PLoS One. 2010. PMID: 20824187 Free PMC article.
Selection of an HLA-C*03:04-Restricted HIV-1 p24 Gag Sequence Variant Is Associated with Viral Escape from KIR2DL3+ Natural Killer Cells: Data from an Observational Cohort in South Africa.
Hölzemer A, Thobakgale CF, Jimenez Cruz CA, Garcia-Beltran WF, Carlson JM, van Teijlingen NH, Mann JK, Jaggernath M, Kang SG, Körner C, Chung AW, Schafer JL, Evans DT, Alter G, Walker BD, Goulder PJ, Carrington M, Hartmann P, Pertel T, Zhou R, Ndung'u T, Altfeld M. Hölzemer A, et al. Among authors: carlson jm. PLoS Med. 2015 Nov 17;12(11):e1001900; discussion e1001900. doi: 10.1371/journal.pmed.1001900. eCollection 2015 Nov. PLoS Med. 2015. PMID: 26575988 Free PMC article.
Aminopeptidase substrate preference affects HIV epitope presentation and predicts immune escape patterns in HIV-infected individuals.
Zhang SC, Martin E, Shimada M, Godfrey SB, Fricke J, Locastro S, Lai NY, Liebesny P, Carlson JM, Brumme CJ, Ogbechie OA, Chen H, Walker BD, Brumme ZL, Kavanagh DG, Le Gall S. Zhang SC, et al. Among authors: carlson jm. J Immunol. 2012 Jun 15;188(12):5924-34. doi: 10.4049/jimmunol.1200219. Epub 2012 May 14. J Immunol. 2012. PMID: 22586036 Free PMC article.
290 results