Cantini L - Search Results

1

Independent Component Analysis for Unraveling the Complexity of Cancer Omics Datasets.

Sompairac N, Nazarov PV, Czerwinska U, Cantini L, Biton A, Molkenov A, Zhumadilov Z, Barillot E, Radvanyi F, Gorban A, Kairov U, Zinovyev A. Sompairac N, et al. Among authors: cantini l. Int J Mol Sci. 2019 Sep 7;20(18):4414. doi: 10.3390/ijms20184414. Int J Mol Sci. 2019. PMID: 31500324 Free PMC article. Review.

2

A review of computational approaches detecting microRNAs involved in cancer.

Cantini L, Caselle M, Forget A, Zinovyev A, Barillot E, Martignetti L. Cantini L, et al. Front Biosci (Landmark Ed). 2017 Jun 1;22(10):1774-1791. doi: 10.2741/4571. Front Biosci (Landmark Ed). 2017. PMID: 28410145 Free article. Review.

3

Determining the optimal number of independent components for reproducible transcriptomic data analysis.

Kairov U, Cantini L, Greco A, Molkenov A, Czerwinska U, Barillot E, Zinovyev A. Kairov U, et al. Among authors: cantini l. BMC Genomics. 2017 Sep 11;18(1):712. doi: 10.1186/s12864-017-4112-9. BMC Genomics. 2017. PMID: 28893186 Free PMC article.

4

Classification of gene signatures for their information value and functional redundancy.

Cantini L, Calzone L, Martignetti L, Rydenfelt M, Blüthgen N, Barillot E, Zinovyev A. Cantini L, et al. NPJ Syst Biol Appl. 2017 Dec 19;4:2. doi: 10.1038/s41540-017-0038-8. eCollection 2018. NPJ Syst Biol Appl. 2017. PMID: 29263798 Free PMC article.

5

Identification of microRNA clusters cooperatively acting on epithelial to mesenchymal transition in triple negative breast cancer.

Cantini L, Bertoli G, Cava C, Dubois T, Zinovyev A, Caselle M, Castiglioni I, Barillot E, Martignetti L. Cantini L, et al. Nucleic Acids Res. 2019 Mar 18;47(5):2205-2215. doi: 10.1093/nar/gkz016. Nucleic Acids Res. 2019. PMID: 30657980 Free PMC article.

6

Assessing reproducibility of matrix factorization methods in independent transcriptomes.

Cantini L, Kairov U, de Reyniès A, Barillot E, Radvanyi F, Zinovyev A. Cantini L, et al. Bioinformatics. 2019 Nov 1;35(21):4307-4313. doi: 10.1093/bioinformatics/btz225. Bioinformatics. 2019. PMID: 30938767 Free PMC article.

7

Molecular Inverse Comorbidity between Alzheimer's Disease and Lung Cancer: New Insights from Matrix Factorization.

Greco A, Sanchez Valle J, Pancaldi V, Baudot A, Barillot E, Caselle M, Valencia A, Zinovyev A, Cantini L. Greco A, et al. Among authors: cantini l. Int J Mol Sci. 2019 Jun 26;20(13):3114. doi: 10.3390/ijms20133114. Int J Mol Sci. 2019. PMID: 31247897 Free PMC article.

8

Interpreting pathways to discover cancer driver genes with Moonlight.

Colaprico A, Olsen C, Bailey MH, Odom GJ, Terkelsen T, Silva TC, Olsen AV, Cantini L, Zinovyev A, Barillot E, Noushmehr H, Bertoli G, Castiglioni I, Cava C, Bontempi G, Chen XS, Papaleo E. Colaprico A, et al. Among authors: cantini l. Nat Commun. 2020 Jan 3;11(1):69. doi: 10.1038/s41467-019-13803-0. Nat Commun. 2020. PMID: 31900418 Free PMC article.

9

Collective intelligence defines biological functions in Wikipedia as communities in the hidden protein connection network.

Zinovyev A, Czerwinska U, Cantini L, Barillot E, Frahm KM, Shepelyansky DL. Zinovyev A, et al. Among authors: cantini l. PLoS Comput Biol. 2020 Feb 18;16(2):e1007652. doi: 10.1371/journal.pcbi.1007652. eCollection 2020 Feb. PLoS Comput Biol. 2020. PMID: 32069277 Free PMC article.

10

Benchmarking joint multi-omics dimensionality reduction approaches for the study of cancer.

Cantini L, Zakeri P, Hernandez C, Naldi A, Thieffry D, Remy E, Baudot A. Cantini L, et al. Nat Commun. 2021 Jan 5;12(1):124. doi: 10.1038/s41467-020-20430-7. Nat Commun. 2021. PMID: 33402734 Free PMC article.

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