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Towards complete and error-free genome assemblies of all vertebrate species.
Nature. 2021 Apr;592(7856):737-746. doi: 10.1038/s41586-021-03451-0. Epub 2021 Apr 28.
Nature. 2021.
PMID: 33911273
Free PMC article.
De novo PacBio long-read and phased avian genome assemblies correct and add to reference genes generated with intermediate and short reads.
Korlach J, Gedman G, Kingan SB, Chin CS, Howard JT, Audet JN, Cantin L, Jarvis ED.
Korlach J, et al.
Gigascience. 2017 Oct 1;6(10):1-16. doi: 10.1093/gigascience/gix085.
Gigascience. 2017.
PMID: 29020750
Free PMC article.
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Controlling for activity-dependent genes and behavioral states is critical for determining brain relationships within and across species.
Biegler MT, Cantin LJ, Scarano DL, Jarvis ED.
Biegler MT, et al. Among authors: cantin lj.
J Comp Neurol. 2021 Aug;529(12):3206-3221. doi: 10.1002/cne.25157. Epub 2021 May 4.
J Comp Neurol. 2021.
PMID: 33855704
Free PMC article.
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Forebrain nuclei linked to woodpecker territorial drum displays mirror those that enable vocal learning in songbirds.
Schuppe ER, Cantin L, Chakraborty M, Biegler MT, Jarvis ER, Chen CC, Hara E, Bertelsen MF, Witt CC, Jarvis ED, Fuxjager MJ.
Schuppe ER, et al.
PLoS Biol. 2022 Sep 20;20(9):e3001751. doi: 10.1371/journal.pbio.3001751. eCollection 2022 Sep.
PLoS Biol. 2022.
PMID: 36125990
Free PMC article.
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False gene and chromosome losses in genome assemblies caused by GC content variation and repeats.
Kim J, Lee C, Ko BJ, Yoo DA, Won S, Phillippy AM, Fedrigo O, Zhang G, Howe K, Wood J, Durbin R, Formenti G, Brown S, Cantin L, Mello CV, Cho S, Rhie A, Kim H, Jarvis ED.
Kim J, et al.
Genome Biol. 2022 Sep 27;23(1):204. doi: 10.1186/s13059-022-02765-0.
Genome Biol. 2022.
PMID: 36167554
Free PMC article.
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Industrial scale high-throughput screening delivers multiple fast acting macrofilaricides.
Clare RH, Bardelle C, Harper P, Hong WD, Börjesson U, Johnston KL, Collier M, Myhill L, Cassidy A, Plant D, Plant H, Clark R, Cook DAN, Steven A, Archer J, McGillan P, Charoensutthivarakul S, Bibby J, Sharma R, Nixon GL, Slatko BE, Cantin L, Wu B, Turner J, Ford L, Rich K, Wigglesworth M, Berry NG, O'Neill PM, Taylor MJ, Ward SA.
Clare RH, et al.
Nat Commun. 2019 Jan 2;10(1):11. doi: 10.1038/s41467-018-07826-2.
Nat Commun. 2019.
PMID: 30602718
Free PMC article.
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Development of a High-Throughput Cytometric Screen to Identify Anti- Wolbachia Compounds: The Power of Public-Private Partnership.
Clare RH, Clark R, Bardelle C, Harper P, Collier M, Johnston KL, Plant H, Plant D, McCall E, Slatko BE, Cantin L, Wu B, Ford L, Murray D, Rich K, Wigglesworth M, Taylor MJ, Ward SA.
Clare RH, et al.
SLAS Discov. 2019 Jun;24(5):537-547. doi: 10.1177/2472555219838341. Epub 2019 Apr 8.
SLAS Discov. 2019.
PMID: 30958712
Free PMC article.
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Improved metagenome assemblies through selective enrichment of bacterial genomic DNA from eukaryotic host genomic DNA using ATAC-seq.
Cantin LJ, Dunning Hotopp JC, Foster JM.
Cantin LJ, et al.
Front Microbiol. 2024 Feb 15;15:1352378. doi: 10.3389/fmicb.2024.1352378. eCollection 2024.
Front Microbiol. 2024.
PMID: 38426058
Free PMC article.
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