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Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure.
Gordon SP, Contreras-Moreira B, Woods DP, Des Marais DL, Burgess D, Shu S, Stritt C, Roulin AC, Schackwitz W, Tyler L, Martin J, Lipzen A, Dochy N, Phillips J, Barry K, Geuten K, Budak H, Juenger TE, Amasino R, Caicedo AL, Goodstein D, Davidson P, Mur LAJ, Figueroa M, Freeling M, Catalan P, Vogel JP. Gordon SP, et al. Among authors: caicedo al. Nat Commun. 2017 Dec 19;8(1):2184. doi: 10.1038/s41467-017-02292-8. Nat Commun. 2017. PMID: 29259172 Free PMC article.
Brachypodium as a model for the grasses: today and the future.
Brkljacic J, Grotewold E, Scholl R, Mockler T, Garvin DF, Vain P, Brutnell T, Sibout R, Bevan M, Budak H, Caicedo AL, Gao C, Gu Y, Hazen SP, Holt BF 3rd, Hong SY, Jordan M, Manzaneda AJ, Mitchell-Olds T, Mochida K, Mur LA, Park CM, Sedbrook J, Watt M, Zheng SJ, Vogel JP. Brkljacic J, et al. Among authors: caicedo al. Plant Physiol. 2011 Sep;157(1):3-13. doi: 10.1104/pp.111.179531. Epub 2011 Jul 19. Plant Physiol. 2011. PMID: 21771916 Free PMC article. No abstract available.
Environmental niche variation and evolutionary diversification of the Brachypodium distachyon grass complex species in their native circum-Mediterranean range.
López-Alvarez D, Manzaneda AJ, Rey PJ, Giraldo P, Benavente E, Allainguillaume J, Mur L, Caicedo AL, Hazen SP, Breiman A, Ezrati S, Catalán P. López-Alvarez D, et al. Among authors: caicedo al. Am J Bot. 2015 Jul;102(7):1073-88. doi: 10.3732/ajb.1500128. Epub 2015 Jul 16. Am J Bot. 2015. PMID: 26199365 Free article.
Signatures of adaptation in the weedy rice genome.
Li LF, Li YL, Jia Y, Caicedo AL, Olsen KM. Li LF, et al. Among authors: caicedo al. Nat Genet. 2017 May;49(5):811-814. doi: 10.1038/ng.3825. Epub 2017 Apr 3. Nat Genet. 2017. PMID: 28369039
Molecular evolution of shattering loci in U.S. weedy rice.
Thurber CS, Reagon M, Gross BL, Olsen KM, Jia Y, Caicedo AL. Thurber CS, et al. Among authors: caicedo al. Mol Ecol. 2010 Aug;19(16):3271-84. doi: 10.1111/j.1365-294X.2010.04708.x. Epub 2010 Jun 24. Mol Ecol. 2010. PMID: 20584132 Free PMC article.
54 results