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Population Genomics Reveals the Underlying Structure of the Small Pelagic European Sardine and Suggests Low Connectivity within Macaronesia.
da Fonseca RR, Campos PF, Rey-Iglesia A, Barroso GV, Bergeron LA, Nande M, Tuya F, Abidli S, Pérez M, Riveiro I, Carrera P, Jurado-Ruzafa A, G Santamaría MT, Faria R, Machado AM, Fonseca MM, Froufe E, C Castro LF. da Fonseca RR, et al. Among authors: c castro lf. Genes (Basel). 2024 Jan 27;15(2):170. doi: 10.3390/genes15020170. Genes (Basel). 2024. PMID: 38397160 Free PMC article.
A novel assembly pipeline and functional annotations for targeted sequencing: A case study on the globally threatened Margaritiferidae (Bivalvia: Unionida).
Gomes-Dos-Santos A, Froufe E, Pfeiffer JM, Johnson NA, Smith CH, Machado AM, C Castro LF, Do VT, Hattori A, Garrison N, Whelan NV, Bolotov IN, Vikhrev IV, Kondakov AV, Ghamizi M, Prié V, Bogan AE, Lopes Lima M. Gomes-Dos-Santos A, et al. Among authors: c castro lf. Mol Ecol Resour. 2023 Aug;23(6):1403-1422. doi: 10.1111/1755-0998.13802. Epub 2023 Apr 24. Mol Ecol Resour. 2023. PMID: 37092367
"Out of the Can": A Draft Genome Assembly, Liver Transcriptome, and Nutrigenomics of the European Sardine, Sardina pilchardus.
Machado AM, Tørresen OK, Kabeya N, Couto A, Petersen B, Felício M, Campos PF, Fonseca E, Bandarra N, Lopes-Marques M, Ferraz R, Ruivo R, Fonseca MM, Jentoft S, Monroig Ó, da Fonseca RR, C Castro LF. Machado AM, et al. Among authors: c castro lf. Genes (Basel). 2018 Oct 9;9(10):485. doi: 10.3390/genes9100485. Genes (Basel). 2018. PMID: 30304855 Free PMC article.