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Data aggregation at the level of molecular pathways improves stability of experimental transcriptomic and proteomic data.
Borisov N, Suntsova M, Sorokin M, Garazha A, Kovalchuk O, Aliper A, Ilnitskaya E, Lezhnina K, Korzinkin M, Tkachev V, Saenko V, Saenko Y, Sokov DG, Gaifullin NM, Kashintsev K, Shirokorad V, Shabalina I, Zhavoronkov A, Mishra B, Cantor CR, Buzdin A. Borisov N, et al. Among authors: buzdin a. Cell Cycle. 2017 Oct 2;16(19):1810-1823. doi: 10.1080/15384101.2017.1361068. Epub 2017 Aug 21. Cell Cycle. 2017. PMID: 28825872 Free PMC article.
Plasma exosomes stimulate breast cancer metastasis through surface interactions and activation of FAK signaling.
Shtam T, Naryzhny S, Samsonov R, Karasik D, Mizgirev I, Kopylov A, Petrenko E, Zabrodskaya Y, Kamyshinsky R, Nikitin D, Sorokin M, Buzdin A, Gil-Henn H, Malek A. Shtam T, et al. Among authors: buzdin a. Breast Cancer Res Treat. 2019 Feb;174(1):129-141. doi: 10.1007/s10549-018-5043-0. Epub 2018 Nov 27. Breast Cancer Res Treat. 2019. PMID: 30484103
Shambhala: a platform-agnostic data harmonizer for gene expression data.
Borisov N, Shabalina I, Tkachev V, Sorokin M, Garazha A, Pulin A, Eremin II, Buzdin A. Borisov N, et al. Among authors: buzdin a. BMC Bioinformatics. 2019 Feb 6;20(1):66. doi: 10.1186/s12859-019-2641-8. BMC Bioinformatics. 2019. PMID: 30727942 Free PMC article.
224 results