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Correction to: SPEAQeasy: a scalable pipeline for expression analysis and quantification for R/bioconductor‑powered RNA‑seq analyses.
Eagles NJ, Burke EE, Leonard J, Barry BK, Stolz JM, Huuki L, Phan BN, Serrato VL, Gutiérrez-Millán E, Aguilar-Ordoñez I, Jaffe AE, Collado-Torres L. Eagles NJ, et al. Among authors: burke ee. BMC Bioinformatics. 2021 Jul 22;22(1):381. doi: 10.1186/s12859-021-04283-5. BMC Bioinformatics. 2021. PMID: 34294043 Free PMC article. No abstract available.
Regional Heterogeneity in Gene Expression, Regulation, and Coherence in the Frontal Cortex and Hippocampus across Development and Schizophrenia.
Collado-Torres L, Burke EE, Peterson A, Shin J, Straub RE, Rajpurohit A, Semick SA, Ulrich WS; BrainSeq Consortium; Price AJ, Valencia C, Tao R, Deep-Soboslay A, Hyde TM, Kleinman JE, Weinberger DR, Jaffe AE. Collado-Torres L, et al. Among authors: burke ee. Neuron. 2019 Jul 17;103(2):203-216.e8. doi: 10.1016/j.neuron.2019.05.013. Epub 2019 Jun 4. Neuron. 2019. PMID: 31174959 Free PMC article.
Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs.
Burke EE, Chenoweth JG, Shin JH, Collado-Torres L, Kim SK, Micali N, Wang Y, Colantuoni C, Straub RE, Hoeppner DJ, Chen HY, Sellers A, Shibbani K, Hamersky GR, Diaz Bustamante M, Phan BN, Ulrich WS, Valencia C, Jaishankar A, Price AJ, Rajpurohit A, Semick SA, Bürli RW, Barrow JC, Hiler DJ, Page SC, Martinowich K, Hyde TM, Kleinman JE, Berman KF, Apud JA, Cross AJ, Brandon NJ, Weinberger DR, Maher BJ, McKay RDG, Jaffe AE. Burke EE, et al. Nat Commun. 2020 Jan 23;11(1):462. doi: 10.1038/s41467-019-14266-z. Nat Commun. 2020. PMID: 31974374 Free PMC article.
A myelin-related transcriptomic profile is shared by Pitt-Hopkins syndrome models and human autism spectrum disorder.
Phan BN, Bohlen JF, Davis BA, Ye Z, Chen HY, Mayfield B, Sripathy SR, Cerceo Page S, Campbell MN, Smith HL, Gallop D, Kim H, Thaxton CL, Simon JM, Burke EE, Shin JH, Kennedy AJ, Sweatt JD, Philpot BD, Jaffe AE, Maher BJ. Phan BN, et al. Among authors: burke ee. Nat Neurosci. 2020 Mar;23(3):375-385. doi: 10.1038/s41593-019-0578-x. Epub 2020 Feb 3. Nat Neurosci. 2020. PMID: 32015540 Free PMC article.
Profiling gene expression in the human dentate gyrus granule cell layer reveals insights into schizophrenia and its genetic risk.
Jaffe AE, Hoeppner DJ, Saito T, Blanpain L, Ukaigwe J, Burke EE, Collado-Torres L, Tao R, Tajinda K, Maynard KR, Tran MN, Martinowich K, Deep-Soboslay A, Shin JH, Kleinman JE, Weinberger DR, Matsumoto M, Hyde TM. Jaffe AE, et al. Among authors: burke ee. Nat Neurosci. 2020 Apr;23(4):510-519. doi: 10.1038/s41593-020-0604-z. Epub 2020 Mar 16. Nat Neurosci. 2020. PMID: 32203495
Developmental Profile of Psychiatric Risk Associated With Voltage-Gated Cation Channel Activity.
Clifton NE, Collado-Torres L, Burke EE, Pardiñas AF, Harwood JC, Di Florio A, Walters JTR, Owen MJ, O'Donovan MC, Weinberger DR, Holmans PA, Jaffe AE, Hall J. Clifton NE, et al. Among authors: burke ee. Biol Psychiatry. 2021 Sep 15;90(6):399-408. doi: 10.1016/j.biopsych.2021.03.009. Epub 2021 Mar 13. Biol Psychiatry. 2021. PMID: 33965196 Free PMC article.
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