Broadhurst DI - Search Results

1

Toward collaborative open data science in metabolomics using Jupyter Notebooks and cloud computing.

Mendez KM, Pritchard L, Reinke SN, Broadhurst DI. Mendez KM, et al. Among authors: broadhurst di. Metabolomics. 2019 Sep 14;15(10):125. doi: 10.1007/s11306-019-1588-0. Metabolomics. 2019. PMID: 31522294 Free PMC article. Review.

2

Guidelines and considerations for the use of system suitability and quality control samples in mass spectrometry assays applied in untargeted clinical metabolomic studies.

Broadhurst D, Goodacre R, Reinke SN, Kuligowski J, Wilson ID, Lewis MR, Dunn WB. Broadhurst D, et al. Metabolomics. 2018;14(6):72. doi: 10.1007/s11306-018-1367-3. Epub 2018 May 18. Metabolomics. 2018. PMID: 29805336 Free PMC article. Review.

3

The application of artificial neural networks in metabolomics: a historical perspective.

Mendez KM, Broadhurst DI, Reinke SN. Mendez KM, et al. Among authors: broadhurst di. Metabolomics. 2019 Oct 18;15(11):142. doi: 10.1007/s11306-019-1608-0. Metabolomics. 2019. PMID: 31628551 Review.

4

A comparative evaluation of the generalised predictive ability of eight machine learning algorithms across ten clinical metabolomics data sets for binary classification.

Mendez KM, Reinke SN, Broadhurst DI. Mendez KM, et al. Among authors: broadhurst di. Metabolomics. 2019 Nov 15;15(12):150. doi: 10.1007/s11306-019-1612-4. Metabolomics. 2019. PMID: 31728648 Free PMC article.

5

Migrating from partial least squares discriminant analysis to artificial neural networks: a comparison of functionally equivalent visualisation and feature contribution tools using jupyter notebooks.

Mendez KM, Broadhurst DI, Reinke SN. Mendez KM, et al. Among authors: broadhurst di. Metabolomics. 2020 Jan 21;16(2):17. doi: 10.1007/s11306-020-1640-0. Metabolomics. 2020. PMID: 31965332 Free PMC article.

6

Metabolomics reveals mouse plasma metabolite responses to acute exercise and effects of disrupting AMPK-glycogen interactions.

Belhaj MR, Lawler NG, Hawley JA, Broadhurst DI, Hoffman NJ, Reinke SN. Belhaj MR, et al. Among authors: broadhurst di. Front Mol Biosci. 2022 Aug 24;9:957549. doi: 10.3389/fmolb.2022.957549. eCollection 2022. Front Mol Biosci. 2022. PMID: 36090035 Free PMC article.

7

OnPLS-Based Multi-Block Data Integration: A Multivariate Approach to Interrogating Biological Interactions in Asthma.

Reinke SN, Galindo-Prieto B, Skotare T, Broadhurst DI, Singhania A, Horowitz D, Djukanović R, Hinks TSC, Geladi P, Trygg J, Wheelock CE. Reinke SN, et al. Among authors: broadhurst di. Anal Chem. 2018 Nov 20;90(22):13400-13408. doi: 10.1021/acs.analchem.8b03205. Epub 2018 Nov 2. Anal Chem. 2018. PMID: 30335973 Free PMC article.

8

Moving metabolomics from a data-driven science to an integrative systems science.

Reinke SN, Broadhurst DI. Reinke SN, et al. Among authors: broadhurst di. Genome Med. 2012 Nov 15;4(11):85. doi: 10.1186/gm386. eCollection 2012. Genome Med. 2012. PMID: 23153094 Free PMC article.

9

Lipopolysaccharide-induced interferon response networks at birth are predictive of severe viral lower respiratory infections in the first year of life.

Read JF, Serralha M, Mok D, Holt BJ, Cruickshank M, Karpievitch YV, Broadhurst DI, Sly PD, Strickland DH, Reinke SN, Holt PG, Bosco A. Read JF, et al. Among authors: broadhurst di. Front Immunol. 2022 Aug 5;13:876654. doi: 10.3389/fimmu.2022.876654. eCollection 2022. Front Immunol. 2022. PMID: 35990635 Free PMC article.

10

A strategy for advancing for population-based scientific discovery using the metabolome: the establishment of the Metabolomics Society Metabolomic Epidemiology Task Group.

Lasky-Su J, Kelly RS, Wheelock CE, Broadhurst D. Lasky-Su J, et al. Metabolomics. 2021 May 2;17(5):45. doi: 10.1007/s11306-021-01789-0. Metabolomics. 2021. PMID: 33937923 Free PMC article. Review.

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