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NCBI's Virus Discovery Codeathon: Building "FIVE" -The Federated Index of Viral Experiments API Index.
Martí-Carreras J, Gener AR, Miller SD, Brito AF, Camacho CE, Connor R, Deboutte W, Glickman C, Kristensen DM, Meyer WK, Modha S, Norris AL, Saha S, Belford AK, Biederstedt E, Brister JR, Buchmann JP, Cooley NP, Edwards RA, Javkar K, Muchow M, Muralidharan HS, Pepe-Ranney C, Shah N, Shakya M, Tisza MJ, Tully BJ, Vanmechelen B, Virta VC, Weissman JL, Zalunin V, Efremov A, Busby B. Martí-Carreras J, et al. Among authors: brister jr. Viruses. 2020 Dec 10;12(12):1424. doi: 10.3390/v12121424. Viruses. 2020. PMID: 33322070 Free PMC article.
Virus Variation Resource--recent updates and future directions.
Brister JR, Bao Y, Zhdanov SA, Ostapchuck Y, Chetvernin V, Kiryutin B, Zaslavsky L, Kimelman M, Tatusova TA. Brister JR, et al. Nucleic Acids Res. 2014 Jan;42(Database issue):D660-5. doi: 10.1093/nar/gkt1268. Epub 2013 Dec 4. Nucleic Acids Res. 2014. PMID: 24304891 Free PMC article.
NCBI viral genomes resource.
Brister JR, Ako-Adjei D, Bao Y, Blinkova O. Brister JR, et al. Nucleic Acids Res. 2015 Jan;43(Database issue):D571-7. doi: 10.1093/nar/gku1207. Epub 2014 Nov 26. Nucleic Acids Res. 2015. PMID: 25428358 Free PMC article.
Database resources of the National Center for Biotechnology Information.
Sayers EW, Agarwala R, Bolton EE, Brister JR, Canese K, Clark K, Connor R, Fiorini N, Funk K, Hefferon T, Holmes JB, Kim S, Kimchi A, Kitts PA, Lathrop S, Lu Z, Madden TL, Marchler-Bauer A, Phan L, Schneider VA, Schoch CL, Pruitt KD, Ostell J. Sayers EW, et al. Among authors: brister jr. Nucleic Acids Res. 2019 Jan 8;47(D1):D23-D28. doi: 10.1093/nar/gky1069. Nucleic Acids Res. 2019. PMID: 30395293 Free PMC article.
Analysis of Spounaviruses as a Case Study for the Overdue Reclassification of Tailed Phages.
Barylski J, Enault F, Dutilh BE, Schuller MB, Edwards RA, Gillis A, Klumpp J, Knezevic P, Krupovic M, Kuhn JH, Lavigne R, Oksanen HM, Sullivan MB, Jang HB, Simmonds P, Aiewsakun P, Wittmann J, Tolstoy I, Brister JR, Kropinski AM, Adriaenssens EM. Barylski J, et al. Among authors: brister jr. Syst Biol. 2020 Jan 1;69(1):110-123. doi: 10.1093/sysbio/syz036. Syst Biol. 2020. PMID: 31127947 Free PMC article.
Perspective on taxonomic classification of uncultivated viruses.
Dutilh BE, Varsani A, Tong Y, Simmonds P, Sabanadzovic S, Rubino L, Roux S, Muñoz AR, Lood C, Lefkowitz EJ, Kuhn JH, Krupovic M, Edwards RA, Brister JR, Adriaenssens EM, Sullivan MB. Dutilh BE, et al. Among authors: brister jr. Curr Opin Virol. 2021 Dec;51:207-215. doi: 10.1016/j.coviro.2021.10.011. Epub 2021 Nov 12. Curr Opin Virol. 2021. PMID: 34781105 Free article. Review.
Filovirus RefSeq entries: evaluation and selection of filovirus type variants, type sequences, and names.
Kuhn JH, Andersen KG, Bào Y, Bavari S, Becker S, Bennett RS, Bergman NH, Blinkova O, Bradfute S, Brister JR, Bukreyev A, Chandran K, Chepurnov AA, Davey RA, Dietzgen RG, Doggett NA, Dolnik O, Dye JM, Enterlein S, Fenimore PW, Formenty P, Freiberg AN, Garry RF, Garza NL, Gire SK, Gonzalez JP, Griffiths A, Happi CT, Hensley LE, Herbert AS, Hevey MC, Hoenen T, Honko AN, Ignatyev GM, Jahrling PB, Johnson JC, Johnson KM, Kindrachuk J, Klenk HD, Kobinger G, Kochel TJ, Lackemeyer MG, Lackner DF, Leroy EM, Lever MS, Mühlberger E, Netesov SV, Olinger GG, Omilabu SA, Palacios G, Panchal RG, Park DJ, Patterson JL, Paweska JT, Peters CJ, Pettitt J, Pitt L, Radoshitzky SR, Ryabchikova EI, Saphire EO, Sabeti PC, Sealfon R, Shestopalov AM, Smither SJ, Sullivan NJ, Swanepoel R, Takada A, Towner JS, van der Groen G, Volchkov VE, Volchkova VA, Wahl-Jensen V, Warren TK, Warfield KL, Weidmann M, Nichol ST. Kuhn JH, et al. Among authors: brister jr. Viruses. 2014 Sep 26;6(9):3663-82. doi: 10.3390/v6093663. Viruses. 2014. PMID: 25256396 Free PMC article.
Nomenclature- and database-compatible names for the two Ebola virus variants that emerged in Guinea and the Democratic Republic of the Congo in 2014.
Kuhn JH, Andersen KG, Baize S, Bào Y, Bavari S, Berthet N, Blinkova O, Brister JR, Clawson AN, Fair J, Gabriel M, Garry RF, Gire SK, Goba A, Gonzalez JP, Günther S, Happi CT, Jahrling PB, Kapetshi J, Kobinger G, Kugelman JR, Leroy EM, Maganga GD, Mbala PK, Moses LM, Muyembe-Tamfum JJ, N'Faly M, Nichol ST, Omilabu SA, Palacios G, Park DJ, Paweska JT, Radoshitzky SR, Rossi CA, Sabeti PC, Schieffelin JS, Schoepp RJ, Sealfon R, Swanepoel R, Towner JS, Wada J, Wauquier N, Yozwiak NL, Formenty P. Kuhn JH, et al. Among authors: brister jr. Viruses. 2014 Nov 24;6(11):4760-99. doi: 10.3390/v6114760. Viruses. 2014. PMID: 25421896 Free PMC article.
57 results