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TypOn: the microbial typing ontology.
Vaz C, Francisco AP, Silva M, Jolley KA, Bray JE, Pouseele H, Rothganger J, Ramirez M, Carriço JA. Vaz C, et al. Among authors: bray je. J Biomed Semantics. 2014 Oct 18;5(1):43. doi: 10.1186/2041-1480-5-43. eCollection 2014. J Biomed Semantics. 2014. PMID: 25584183 Free PMC article.
MLST revisited: the gene-by-gene approach to bacterial genomics.
Maiden MC, Jansen van Rensburg MJ, Bray JE, Earle SG, Ford SA, Jolley KA, McCarthy ND. Maiden MC, et al. Among authors: bray je. Nat Rev Microbiol. 2013 Oct;11(10):728-36. doi: 10.1038/nrmicro3093. Epub 2013 Sep 2. Nat Rev Microbiol. 2013. PMID: 23979428 Free PMC article. Review.
Defining the estimated core genome of bacterial populations using a Bayesian decision model.
van Tonder AJ, Mistry S, Bray JE, Hill DM, Cody AJ, Farmer CL, Klugman KP, von Gottberg A, Bentley SD, Parkhill J, Jolley KA, Maiden MC, Brueggemann AB. van Tonder AJ, et al. Among authors: bray je. PLoS Comput Biol. 2014 Aug 21;10(8):e1003788. doi: 10.1371/journal.pcbi.1003788. eCollection 2014 Aug. PLoS Comput Biol. 2014. PMID: 25144616 Free PMC article.
Ecological Overlap and Horizontal Gene Transfer in Staphylococcus aureus and Staphylococcus epidermidis.
Méric G, Miragaia M, de Been M, Yahara K, Pascoe B, Mageiros L, Mikhail J, Harris LG, Wilkinson TS, Rolo J, Lamble S, Bray JE, Jolley KA, Hanage WP, Bowden R, Maiden MC, Mack D, de Lencastre H, Feil EJ, Corander J, Sheppard SK. Méric G, et al. Among authors: bray je. Genome Biol Evol. 2015 Apr 16;7(5):1313-28. doi: 10.1093/gbe/evv066. Genome Biol Evol. 2015. PMID: 25888688 Free PMC article.
Genomic epidemiology of age-associated meningococcal lineages in national surveillance: an observational cohort study.
Hill DM, Lucidarme J, Gray SJ, Newbold LS, Ure R, Brehony C, Harrison OB, Bray JE, Jolley KA, Bratcher HB, Parkhill J, Tang CM, Borrow R, Maiden MC. Hill DM, et al. Among authors: bray je. Lancet Infect Dis. 2015 Dec;15(12):1420-8. doi: 10.1016/S1473-3099(15)00267-4. Epub 2015 Oct 27. Lancet Infect Dis. 2015. PMID: 26515523 Free PMC article.
Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples.
Harris LG, Murray S, Pascoe B, Bray J, Meric G, Mageiros L, Wilkinson TS, Jeeves R, Rohde H, Schwarz S, de Lencastre H, Miragaia M, Rolo J, Bowden R, Jolley KA, Maiden MC, Mack D, Sheppard SK. Harris LG, et al. PLoS One. 2016 Mar 15;11(3):e0151240. doi: 10.1371/journal.pone.0151240. eCollection 2016. PLoS One. 2016. PMID: 26978068 Free PMC article.
Putatively novel serotypes and the potential for reduced vaccine effectiveness: capsular locus diversity revealed among 5405 pneumococcal genomes.
van Tonder AJ, Bray JE, Quirk SJ, Haraldsson G, Jolley KA, Maiden MCJ, Hoffmann S, Bentley SD, Haraldsson Á, Erlendsdóttir H, Kristinsson KG, Brueggemann AB. van Tonder AJ, et al. Among authors: bray je. Microb Genom. 2016 Oct 1;2(10):000090. doi: 10.1099/mgen.0.000090. Microb Genom. 2016. PMID: 28133541 Free PMC article.
165 results