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A CLK3-HMGA2 Alternative Splicing Axis Impacts Human Hematopoietic Stem Cell Molecular Identity throughout Development.
Cesana M, Guo MH, Cacchiarelli D, Wahlster L, Barragan J, Doulatov S, Vo LT, Salvatori B, Trapnell C, Clement K, Cahan P, Tsanov KM, Sousa PM, Tazon-Vega B, Bolondi A, Giorgi FM, Califano A, Rinn JL, Meissner A, Hirschhorn JN, Daley GQ. Cesana M, et al. Among authors: bolondi a. Cell Stem Cell. 2018 Apr 5;22(4):575-588.e7. doi: 10.1016/j.stem.2018.03.012. Cell Stem Cell. 2018. PMID: 29625070 Free PMC article.
Emergence and patterning dynamics of mouse-definitive endoderm.
Pour M, Kumar AS, Farag N, Bolondi A, Kretzmer H, Walther M, Wittler L, Meissner A, Nachman I. Pour M, et al. Among authors: bolondi a. iScience. 2021 Dec 6;25(1):103556. doi: 10.1016/j.isci.2021.103556. eCollection 2022 Jan 21. iScience. 2021. PMID: 34988400 Free PMC article.
T-REX17 is a transiently expressed non-coding RNA essential for human endoderm formation.
Landshammer A, Bolondi A, Kretzmer H, Much C, Buschow R, Rose A, Wu HJ, Mackowiak SD, Braendl B, Giesselmann P, Tornisiello R, Parsi KM, Huey J, Mielke T, Meierhofer D, Maehr R, Hnisz D, Michor F, Rinn JL, Meissner A. Landshammer A, et al. Among authors: bolondi a. Elife. 2023 Jan 31;12:e83077. doi: 10.7554/eLife.83077. Elife. 2023. PMID: 36719724 Free PMC article.
Dynamic antagonism between key repressive pathways maintains the placental epigenome.
Weigert R, Hetzel S, Bailly N, Haggerty C, Ilik IA, Yung PYK, Navarro C, Bolondi A, Kumar AS, Anania C, Brändl B, Meierhofer D, Lupiáñez DG, Müller FJ, Aktas T, Elsässer SJ, Kretzmer H, Smith ZD, Meissner A. Weigert R, et al. Among authors: bolondi a. Nat Cell Biol. 2023 Apr;25(4):579-591. doi: 10.1038/s41556-023-01114-y. Epub 2023 Apr 6. Nat Cell Biol. 2023. PMID: 37024684 Free PMC article.
Reconstructing axial progenitor field dynamics in mouse stem cell-derived embryoids.
Bolondi A, Law BK, Kretzmer H, Gassaloglu SI, Buschow R, Riemenschneider C, Yang D, Walther M, Veenvliet JV, Meissner A, Smith ZD, Chan MM. Bolondi A, et al. Dev Cell. 2024 Apr 3:S1534-5807(24)00192-8. doi: 10.1016/j.devcel.2024.03.024. Online ahead of print. Dev Cell. 2024. PMID: 38579718 Free article.
Spatiotemporal transcriptomic maps of whole mouse embryos at the onset of organogenesis.
Sampath Kumar A, Tian L, Bolondi A, Hernández AA, Stickels R, Kretzmer H, Murray E, Wittler L, Walther M, Barakat G, Haut L, Elkabetz Y, Macosko EZ, Guignard L, Chen F, Meissner A. Sampath Kumar A, et al. Among authors: bolondi a. Nat Genet. 2023 Jul;55(7):1176-1185. doi: 10.1038/s41588-023-01435-6. Epub 2023 Jul 6. Nat Genet. 2023. PMID: 37414952 Free PMC article.
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