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Gut dsDNA virome shows diversity and richness alterations associated with childhood obesity and metabolic syndrome.
iScience. 2021 Jul 24;24(8):102900. doi: 10.1016/j.isci.2021.102900. eCollection 2021 Aug 20.
iScience. 2021.
PMID: 34409269
Free PMC article.
Metatranscriptomic analysis to define the Secrebiome, and 16S rRNA profiling of the gut microbiome in obesity and metabolic syndrome of Mexican children.
Gallardo-Becerra L, Cornejo-Granados F, García-López R, Valdez-Lara A, Bikel S, Canizales-Quinteros S, López-Contreras BE, Mendoza-Vargas A, Nielsen H, Ochoa-Leyva A.
Gallardo-Becerra L, et al. Among authors: bikel s.
Microb Cell Fact. 2020 Mar 6;19(1):61. doi: 10.1186/s12934-020-01319-y.
Microb Cell Fact. 2020.
PMID: 32143621
Free PMC article.
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Protocol for the isolation, sequencing, and analysis of the gut phageome from human fecal samples.
Bikel S, Gallardo-Becerra L, Cornejo-Granados F, Ochoa-Leyva A.
Bikel S, et al.
STAR Protoc. 2022 Feb 9;3(1):101170. doi: 10.1016/j.xpro.2022.101170. eCollection 2022 Mar 18.
STAR Protoc. 2022.
PMID: 35199035
Free PMC article.
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Combining metagenomics, metatranscriptomics and viromics to explore novel microbial interactions: towards a systems-level understanding of human microbiome.
Bikel S, Valdez-Lara A, Cornejo-Granados F, Rico K, Canizales-Quinteros S, Soberón X, Del Pozo-Yauner L, Ochoa-Leyva A.
Bikel S, et al.
Comput Struct Biotechnol J. 2015 Jun 9;13:390-401. doi: 10.1016/j.csbj.2015.06.001. eCollection 2015.
Comput Struct Biotechnol J. 2015.
PMID: 26137199
Free PMC article.
Review.
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A novel approach for human whole transcriptome analysis based on absolute gene expression of microarray data.
Bikel S, Jacobo-Albavera L, Sánchez-Muñoz F, Cornejo-Granados F, Canizales-Quinteros S, Soberón X, Sotelo-Mundo RR, Del Río-Navarro BE, Mendoza-Vargas A, Sánchez F, Ochoa-Leyva A.
Bikel S, et al.
PeerJ. 2017 Dec 8;5:e4133. doi: 10.7717/peerj.4133. eCollection 2017.
PeerJ. 2017.
PMID: 29230367
Free PMC article.
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