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The International Virus Bioinformatics Meeting 2020.
Hufsky F, Beerenwinkel N, Meyer IM, Roux S, Cook GM, Kinsella CM, Lamkiewicz K, Marquet M, Nieuwenhuijse DF, Olendraite I, Paraskevopoulou S, Young F, Dijkman R, Ibrahim B, Kelly J, Le Mercier P, Marz M, Ramette A, Thiel V. Hufsky F, et al. Among authors: beerenwinkel n. Viruses. 2020 Dec 6;12(12):1398. doi: 10.3390/v12121398. Viruses. 2020. PMID: 33291220 Free PMC article.
Challenges in RNA virus bioinformatics.
Marz M, Beerenwinkel N, Drosten C, Fricke M, Frishman D, Hofacker IL, Hoffmann D, Middendorf M, Rattei T, Stadler PF, Töpfer A. Marz M, et al. Among authors: beerenwinkel n. Bioinformatics. 2014 Jul 1;30(13):1793-9. doi: 10.1093/bioinformatics/btu105. Epub 2014 Mar 3. Bioinformatics. 2014. PMID: 24590443 Free PMC article. Review.
Bioinformatics for precision oncology.
Singer J, Irmisch A, Ruscheweyh HJ, Singer F, Toussaint NC, Levesque MP, Stekhoven DJ, Beerenwinkel N. Singer J, et al. Among authors: beerenwinkel n. Brief Bioinform. 2019 May 21;20(3):778-788. doi: 10.1093/bib/bbx143. Brief Bioinform. 2019. PMID: 29272324 Free PMC article. Review.
Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research.
Hufsky F, Lamkiewicz K, Almeida A, Aouacheria A, Arighi C, Bateman A, Baumbach J, Beerenwinkel N, Brandt C, Cacciabue M, Chuguransky S, Drechsel O, Finn RD, Fritz A, Fuchs S, Hattab G, Hauschild AC, Heider D, Hoffmann M, Hölzer M, Hoops S, Kaderali L, Kalvari I, von Kleist M, Kmiecinski R, Kühnert D, Lasso G, Libin P, List M, Löchel HF, Martin MJ, Martin R, Matschinske J, McHardy AC, Mendes P, Mistry J, Navratil V, Nawrocki EP, O'Toole ÁN, Ontiveros-Palacios N, Petrov AI, Rangel-Pineros G, Redaschi N, Reimering S, Reinert K, Reyes A, Richardson L, Robertson DL, Sadegh S, Singer JB, Theys K, Upton C, Welzel M, Williams L, Marz M. Hufsky F, et al. Among authors: beerenwinkel n. Brief Bioinform. 2021 Mar 22;22(2):642-663. doi: 10.1093/bib/bbaa232. Brief Bioinform. 2021. PMID: 33147627 Free PMC article. Review.
ITN-VIROINF: Understanding (Harmful) Virus-Host Interactions by Linking Virology and Bioinformatics.
Goettsch W, Beerenwinkel N, Deng L, Dölken L, Dutilh BE, Erhard F, Kaderali L, von Kleist M, Marquet R, Matthijnssens J, McCallin S, McMahon D, Rattei T, Van Rij RP, Robertson DL, Schwemmle M, Stern-Ginossar N, Marz M. Goettsch W, et al. Among authors: beerenwinkel n. Viruses. 2021 Apr 27;13(5):766. doi: 10.3390/v13050766. Viruses. 2021. PMID: 33925452 Free PMC article.
Detecting Selection in the HIV-1 Genome during Sexual Transmission Events.
Seifert D, Joos B, Braun DL, Oberle CS, Schenkel CD, Kuster H, Grube C, Böni J, Yerly S, Aubert V, Klimkait T, Günthard HF, Beerenwinkel N, Metzner KJ, On Behalf Of The Swiss Hiv Cohort Study. Seifert D, et al. Among authors: beerenwinkel n. Viruses. 2022 Feb 16;14(2):406. doi: 10.3390/v14020406. Viruses. 2022. PMID: 35215999 Free PMC article.
Detection and Molecular Characterization of the SARS-CoV-2 Delta Variant and the Specific Immune Response in Companion Animals in Switzerland.
Kuhlmeier E, Chan T, Agüí CV, Willi B, Wolfensberger A, Beisel C, Topolsky I, Beerenwinkel N, Stadler T, Swiss Sars-CoV-Sequencing Consortium, Jones S, Tyson G, Hosie MJ, Reitt K, Hüttl J, Meli ML, Hofmann-Lehmann R. Kuhlmeier E, et al. Among authors: beerenwinkel n. Viruses. 2023 Jan 15;15(1):245. doi: 10.3390/v15010245. Viruses. 2023. PMID: 36680285 Free PMC article.
Computational Cancer Biology: An Evolutionary Perspective.
Beerenwinkel N, Greenman CD, Lagergren J. Beerenwinkel N, et al. PLoS Comput Biol. 2016 Feb 4;12(2):e1004717. doi: 10.1371/journal.pcbi.1004717. eCollection 2016 Feb. PLoS Comput Biol. 2016. PMID: 26845763 Free PMC article. Review. No abstract available.
Single-Molecule Sequencing Reveals Complex Genome Variation of Hepatitis B Virus during 15 Years of Chronic Infection following Liver Transplantation.
Betz-Stablein BD, Töpfer A, Littlejohn M, Yuen L, Colledge D, Sozzi V, Angus P, Thompson A, Revill P, Beerenwinkel N, Warner N, Luciani F. Betz-Stablein BD, et al. Among authors: beerenwinkel n. J Virol. 2016 Jul 27;90(16):7171-7183. doi: 10.1128/JVI.00243-16. Print 2016 Aug 15. J Virol. 2016. PMID: 27252524 Free PMC article.
Quantitative measures of within-host viral genetic diversity.
Fuhrmann L, Jablonski KP, Beerenwinkel N. Fuhrmann L, et al. Among authors: beerenwinkel n. Curr Opin Virol. 2021 Aug;49:157-163. doi: 10.1016/j.coviro.2021.06.002. Epub 2021 Jun 18. Curr Opin Virol. 2021. PMID: 34153841 Free article. Review.
234 results