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Ecological plant epigenetics: Evidence from model and non-model species, and the way forward.
Richards CL, Alonso C, Becker C, Bossdorf O, Bucher E, Colomé-Tatché M, Durka W, Engelhardt J, Gaspar B, Gogol-Döring A, Grosse I, van Gurp TP, Heer K, Kronholm I, Lampei C, Latzel V, Mirouze M, Opgenoorth L, Paun O, Prohaska SJ, Rensing SA, Stadler PF, Trucchi E, Ullrich K, Verhoeven KJF. Richards CL, et al. Among authors: becker c. Ecol Lett. 2017 Dec;20(12):1576-1590. doi: 10.1111/ele.12858. Epub 2017 Oct 12. Ecol Lett. 2017. PMID: 29027325 Review.
The role of plant epigenetics in biotic interactions.
Alonso C, Ramos-Cruz D, Becker C. Alonso C, et al. Among authors: becker c. New Phytol. 2019 Jan;221(2):731-737. doi: 10.1111/nph.15408. Epub 2018 Aug 29. New Phytol. 2019. PMID: 30156271 Free PMC article. Review.
Signatures of antagonistic pleiotropy in a bacterial flagellin epitope.
Parys K, Colaianni NR, Lee HS, Hohmann U, Edelbacher N, Trgovcevic A, Blahovska Z, Lee D, Mechtler A, Muhari-Portik Z, Madalinski M, Schandry N, Rodríguez-Arévalo I, Becker C, Sonnleitner E, Korte A, Bläsi U, Geldner N, Hothorn M, Jones CD, Dangl JL, Belkhadir Y. Parys K, et al. Among authors: becker c. Cell Host Microbe. 2021 Apr 14;29(4):620-634.e9. doi: 10.1016/j.chom.2021.02.008. Epub 2021 Mar 12. Cell Host Microbe. 2021. PMID: 33713601 Free article.
Epigenetics in plant organismic interactions.
Ramos-Cruz D, Troyee AN, Becker C. Ramos-Cruz D, et al. Among authors: becker c. Curr Opin Plant Biol. 2021 Jun;61:102060. doi: 10.1016/j.pbi.2021.102060. Epub 2021 Jun 1. Curr Opin Plant Biol. 2021. PMID: 34087759 Free article. Review.
The EpiDiverse Plant Epigenome-Wide Association Studies (EWAS) Pipeline.
Can SN, Nunn A, Galanti D, Langenberger D, Becker C, Volmer K, Heer K, Opgenoorth L, Fernandez-Pozo N, Rensing SA. Can SN, et al. Among authors: becker c. Epigenomes. 2021 May 4;5(2):12. doi: 10.3390/epigenomes5020012. Epigenomes. 2021. PMID: 34968299 Free PMC article.
Chromosome-level Thlaspi arvense genome provides new tools for translational research and for a newly domesticated cash cover crop of the cooler climates.
Nunn A, Rodríguez-Arévalo I, Tandukar Z, Frels K, Contreras-Garrido A, Carbonell-Bejerano P, Zhang P, Ramos Cruz D, Jandrasits K, Lanz C, Brusa A, Mirouze M, Dorn K, Galbraith DW, Jarvis BA, Sedbrook JC, Wyse DL, Otto C, Langenberger D, Stadler PF, Weigel D, Marks MD, Anderson JA, Becker C, Chopra R. Nunn A, et al. Among authors: becker c. Plant Biotechnol J. 2022 May;20(5):944-963. doi: 10.1111/pbi.13775. Epub 2022 Feb 6. Plant Biotechnol J. 2022. PMID: 34990041 Free PMC article.
MethylScore, a pipeline for accurate and context-aware identification of differentially methylated regions from population-scale plant whole-genome bisulfite sequencing data.
Hüther P, Hagmann J, Nunn A, Kakoulidou I, Pisupati R, Langenberger D, Weigel D, Johannes F, Schultheiss SJ, Becker C. Hüther P, et al. Among authors: becker c. Quant Plant Biol. 2022 Sep 26;3:e19. doi: 10.1017/qpb.2022.14. eCollection 2022. Quant Plant Biol. 2022. PMID: 37077980 Free PMC article.
Transposon dynamics in the emerging oilseed crop Thlaspi arvense.
Contreras-Garrido A, Galanti D, Movilli A, Becker C, Bossdorf O, Drost HG, Weigel D. Contreras-Garrido A, et al. Among authors: becker c. PLoS Genet. 2024 Jan 31;20(1):e1011141. doi: 10.1371/journal.pgen.1011141. eCollection 2024 Jan. PLoS Genet. 2024. PMID: 38295109 Free PMC article.
3,994 results