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Expression quantitative trait loci mapping identified PtrXB38 as a key hub gene in adventitious root development in Populus.
Yao T, Zhang J, Yates TB, Shrestha HK, Engle NL, Ployet R, John C, Feng K, Bewg WP, Chen MSS, Lu H, Harding SA, Qiao Z, Jawdy SS, Shu M, Yuan W, Mozaffari K, Harman-Ware AE, Happs RM, York LM, Binder BM, Yoshinaga Y, Daum C, Tschaplinski TJ, Abraham PE, Tsai CJ, Barry K, Lipzen A, Schmutz J, Tuskan GA, Chen JG, Muchero W. Yao T, et al. Among authors: barry k. New Phytol. 2023 Sep;239(6):2248-2264. doi: 10.1111/nph.19126. Epub 2023 Jul 24. New Phytol. 2023. PMID: 37488708
Reference genome sequence of the model plant Setaria.
Bennetzen JL, Schmutz J, Wang H, Percifield R, Hawkins J, Pontaroli AC, Estep M, Feng L, Vaughn JN, Grimwood J, Jenkins J, Barry K, Lindquist E, Hellsten U, Deshpande S, Wang X, Wu X, Mitros T, Triplett J, Yang X, Ye CY, Mauro-Herrera M, Wang L, Li P, Sharma M, Sharma R, Ronald PC, Panaud O, Kellogg EA, Brutnell TP, Doust AN, Tuskan GA, Rokhsar D, Devos KM. Bennetzen JL, et al. Among authors: barry k. Nat Biotechnol. 2012 May 13;30(6):555-61. doi: 10.1038/nbt.2196. Nat Biotechnol. 2012. PMID: 22580951
Analysis of clock-regulated genes in Neurospora reveals widespread posttranscriptional control of metabolic potential.
Hurley JM, Dasgupta A, Emerson JM, Zhou X, Ringelberg CS, Knabe N, Lipzen AM, Lindquist EA, Daum CG, Barry KW, Grigoriev IV, Smith KM, Galagan JE, Bell-Pedersen D, Freitag M, Cheng C, Loros JJ, Dunlap JC. Hurley JM, et al. Proc Natl Acad Sci U S A. 2014 Dec 2;111(48):16995-7002. doi: 10.1073/pnas.1418963111. Epub 2014 Oct 31. Proc Natl Acad Sci U S A. 2014. PMID: 25362047 Free PMC article.
Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists.
Martino E, Morin E, Grelet GA, Kuo A, Kohler A, Daghino S, Barry KW, Cichocki N, Clum A, Dockter RB, Hainaut M, Kuo RC, LaButti K, Lindahl BD, Lindquist EA, Lipzen A, Khouja HR, Magnuson J, Murat C, Ohm RA, Singer SW, Spatafora JW, Wang M, Veneault-Fourrey C, Henrissat B, Grigoriev IV, Martin FM, Perotto S. Martino E, et al. Among authors: barry kw. New Phytol. 2018 Feb;217(3):1213-1229. doi: 10.1111/nph.14974. Epub 2018 Jan 7. New Phytol. 2018. PMID: 29315638 Free article.
Genome-wide association studies and expression-based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense-responsive transcription factors in Populus.
Zhang J, Yang Y, Zheng K, Xie M, Feng K, Jawdy SS, Gunter LE, Ranjan P, Singan VR, Engle N, Lindquist E, Barry K, Schmutz J, Zhao N, Tschaplinski TJ, LeBoldus J, Tuskan GA, Chen JG, Muchero W. Zhang J, et al. Among authors: barry k. New Phytol. 2018 Oct;220(2):502-516. doi: 10.1111/nph.15297. Epub 2018 Jul 11. New Phytol. 2018. PMID: 29992670 Free article.
905 results