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Clones of infected cells arise early in HIV-infected individuals.
Coffin JM, Wells DW, Zerbato JM, Kuruc JD, Guo S, Luke BT, Eron JJ, Bale M, Spindler J, Simonetti FR, Hill S, Kearney MF, Maldarelli F, Wu X, Mellors JW, Hughes SH. Coffin JM, et al. JCI Insight. 2019 Jun 20;4(12):e128432. doi: 10.1172/jci.insight.128432. eCollection 2019 Jun 20. JCI Insight. 2019. PMID: 31217357 Free PMC article.
HIV evolution and diversity in ART-treated patients.
van Zyl G, Bale MJ, Kearney MF. van Zyl G, et al. Among authors: bale mj. Retrovirology. 2018 Jan 30;15(1):14. doi: 10.1186/s12977-018-0395-4. Retrovirology. 2018. PMID: 29378595 Free PMC article. Review.
Combined HIV-1 sequence and integration site analysis informs viral dynamics and allows reconstruction of replicating viral ancestors.
Patro SC, Brandt LD, Bale MJ, Halvas EK, Joseph KW, Shao W, Wu X, Guo S, Murrell B, Wiegand A, Spindler J, Raley C, Hautman C, Sobolewski M, Fennessey CM, Hu WS, Luke B, Hasson JM, Niyongabo A, Capoferri AA, Keele BF, Milush J, Hoh R, Deeks SG, Maldarelli F, Hughes SH, Coffin JM, Rausch JW, Mellors JW, Kearney MF. Patro SC, et al. Among authors: bale mj. Proc Natl Acad Sci U S A. 2019 Dec 17;116(51):25891-25899. doi: 10.1073/pnas.1910334116. Epub 2019 Nov 27. Proc Natl Acad Sci U S A. 2019. PMID: 31776247 Free PMC article.
Intact HIV Proviruses Persist in Children Seven to Nine Years after Initiation of Antiretroviral Therapy in the First Year of Life.
Katusiime MG, Halvas EK, Wright I, Joseph K, Bale MJ, Kirby-McCullough B, Engelbrecht S, Shao W, Hu WS, Cotton MF, Mellors JW, Kearney MF, van Zyl GU. Katusiime MG, et al. Among authors: bale mj. J Virol. 2020 Jan 31;94(4):e01519-19. doi: 10.1128/JVI.01519-19. Print 2020 Jan 31. J Virol. 2020. PMID: 31776265 Free PMC article.
Integration in oncogenes plays only a minor role in determining the in vivo distribution of HIV integration sites before or during suppressive antiretroviral therapy.
Coffin JM, Bale MJ, Wells D, Guo S, Luke B, Zerbato JM, Sobolewski MD, Sia T, Shao W, Wu X, Maldarelli F, Kearney MF, Mellors JW, Hughes SH. Coffin JM, et al. Among authors: bale mj. PLoS Pathog. 2021 Apr 7;17(4):e1009141. doi: 10.1371/journal.ppat.1009141. eCollection 2021 Apr. PLoS Pathog. 2021. PMID: 33826675 Free PMC article.
CpG Methylation Profiles of HIV-1 Pro-Viral DNA in Individuals on ART.
Boltz VF, Ceriani C, Rausch JW, Shao W, Bale MJ, Keele BF, Hoh R, Milush JM, Deeks SG, Maldarelli F, Kearney MF, Coffin JM. Boltz VF, et al. Among authors: bale mj. Viruses. 2021 Apr 29;13(5):799. doi: 10.3390/v13050799. Viruses. 2021. PMID: 33946976 Free PMC article.
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