Baker D - Search Results

1

Computed structures of core eukaryotic protein complexes.

Humphreys IR, Pei J, Baek M, Krishnakumar A, Anishchenko I, Ovchinnikov S, Zhang J, Ness TJ, Banjade S, Bagde SR, Stancheva VG, Li XH, Liu K, Zheng Z, Barrero DJ, Roy U, Kuper J, Fernández IS, Szakal B, Branzei D, Rizo J, Kisker C, Greene EC, Biggins S, Keeney S, Miller EA, Fromme JC, Hendrickson TL, Cong Q, Baker D. Humphreys IR, et al. Among authors: baker d. Science. 2021 Dec 10;374(6573):eabm4805. doi: 10.1126/science.abm4805. Epub 2021 Dec 10. Science. 2021. PMID: 34762488 Free PMC article.

2

Protein structure prediction and structural genomics.

Baker D, Sali A. Baker D, et al. Science. 2001 Oct 5;294(5540):93-6. doi: 10.1126/science.1065659. Science. 2001. PMID: 11588250

3

De novo prediction of three-dimensional structures for major protein families.

Bonneau R, Strauss CE, Rohl CA, Chivian D, Bradley P, Malmström L, Robertson T, Baker D. Bonneau R, et al. Among authors: baker d. J Mol Biol. 2002 Sep 6;322(1):65-78. doi: 10.1016/s0022-2836(02)00698-8. J Mol Biol. 2002. PMID: 12215415

4

Design of a novel globular protein fold with atomic-level accuracy.

Kuhlman B, Dantas G, Ireton GC, Varani G, Stoddard BL, Baker D. Kuhlman B, et al. Among authors: baker d. Science. 2003 Nov 21;302(5649):1364-8. doi: 10.1126/science.1089427. Science. 2003. PMID: 14631033

5

Toward high-resolution de novo structure prediction for small proteins.

Bradley P, Misura KM, Baker D. Bradley P, et al. Among authors: baker d. Science. 2005 Sep 16;309(5742):1868-71. doi: 10.1126/science.1113801. Science. 2005. PMID: 16166519

6

Progress in modeling of protein structures and interactions.

Schueler-Furman O, Wang C, Bradley P, Misura K, Baker D. Schueler-Furman O, et al. Among authors: baker d. Science. 2005 Oct 28;310(5748):638-42. doi: 10.1126/science.1112160. Science. 2005. PMID: 16254179 Review.

7

Prediction of membrane protein structures with complex topologies using limited constraints.

Barth P, Wallner B, Baker D. Barth P, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 2009 Feb 3;106(5):1409-14. doi: 10.1073/pnas.0808323106. Proc Natl Acad Sci U S A. 2009. PMID: 19190187 Free PMC article.

8

Structure prediction for CASP8 with all-atom refinement using Rosetta.

Raman S, Vernon R, Thompson J, Tyka M, Sadreyev R, Pei J, Kim D, Kellogg E, DiMaio F, Lange O, Kinch L, Sheffler W, Kim BH, Das R, Grishin NV, Baker D. Raman S, et al. Among authors: baker d. Proteins. 2009;77 Suppl 9(0 9):89-99. doi: 10.1002/prot.22540. Proteins. 2009. PMID: 19701941 Free PMC article.

9

Prediction of structures of zinc-binding proteins through explicit modeling of metal coordination geometry.

Wang C, Vernon R, Lange O, Tyka M, Baker D. Wang C, et al. Among authors: baker d. Protein Sci. 2010 Mar;19(3):494-506. doi: 10.1002/pro.327. Protein Sci. 2010. PMID: 20054832 Free PMC article.

10

NMR structure determination for larger proteins using backbone-only data.

Raman S, Lange OF, Rossi P, Tyka M, Wang X, Aramini J, Liu G, Ramelot TA, Eletsky A, Szyperski T, Kennedy MA, Prestegard J, Montelione GT, Baker D. Raman S, et al. Among authors: baker d. Science. 2010 Feb 19;327(5968):1014-8. doi: 10.1126/science.1183649. Epub 2010 Feb 4. Science. 2010. PMID: 20133520 Free PMC article.

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