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Evolutionary forces affecting synonymous variations in plant genomes.
Clément Y, Sarah G, Holtz Y, Homa F, Pointet S, Contreras S, Nabholz B, Sabot F, Sauné L, Ardisson M, Bacilieri R, Besnard G, Berger A, Cardi C, De Bellis F, Fouet O, Jourda C, Khadari B, Lanaud C, Leroy T, Pot D, Sauvage C, Scarcelli N, Tregear J, Vigouroux Y, Yahiaoui N, Ruiz M, Santoni S, Labouisse JP, Pham JL, David J, Glémin S. Clément Y, et al. Among authors: bacilieri r. PLoS Genet. 2017 May 22;13(5):e1006799. doi: 10.1371/journal.pgen.1006799. eCollection 2017 May. PLoS Genet. 2017. PMID: 28531201 Free PMC article.
A large set of 26 new reference transcriptomes dedicated to comparative population genomics in crops and wild relatives.
Sarah G, Homa F, Pointet S, Contreras S, Sabot F, Nabholz B, Santoni S, Sauné L, Ardisson M, Chantret N, Sauvage C, Tregear J, Jourda C, Pot D, Vigouroux Y, Chair H, Scarcelli N, Billot C, Yahiaoui N, Bacilieri R, Khadari B, Boccara M, Barnaud A, Péros JP, Labouisse JP, Pham JL, David J, Glémin S, Ruiz M. Sarah G, et al. Among authors: bacilieri r. Mol Ecol Resour. 2017 May;17(3):565-580. doi: 10.1111/1755-0998.12587. Epub 2016 Aug 29. Mol Ecol Resour. 2017. PMID: 27487989
A small XY chromosomal region explains sex determination in wild dioecious V. vinifera and the reversal to hermaphroditism in domesticated grapevines.
Picq S, Santoni S, Lacombe T, Latreille M, Weber A, Ardisson M, Ivorra S, Maghradze D, Arroyo-Garcia R, Chatelet P, This P, Terral JF, Bacilieri R. Picq S, et al. Among authors: bacilieri r. BMC Plant Biol. 2014 Sep 3;14:229. doi: 10.1186/s12870-014-0229-z. BMC Plant Biol. 2014. PMID: 25179565 Free PMC article.
The wild grape genome sequence provides insights into the transition from dioecy to hermaphroditism during grape domestication.
Badouin H, Velt A, Gindraud F, Flutre T, Dumas V, Vautrin S, Marande W, Corbi J, Sallet E, Ganofsky J, Santoni S, Guyot D, Ricciardelli E, Jepsen K, Käfer J, Berges H, Duchêne E, Picard F, Hugueney P, Tavares R, Bacilieri R, Rustenholz C, Marais GAB. Badouin H, et al. Among authors: bacilieri r. Genome Biol. 2020 Sep 7;21(1):223. doi: 10.1186/s13059-020-02131-y. Genome Biol. 2020. PMID: 32892750 Free PMC article.
Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs.
Laucou V, Launay A, Bacilieri R, Lacombe T, Adam-Blondon AF, Bérard A, Chauveau A, de Andrés MT, Hausmann L, Ibáñez J, Le Paslier MC, Maghradze D, Martinez-Zapater JM, Maul E, Ponnaiah M, Töpfer R, Péros JP, Boursiquot JM. Laucou V, et al. Among authors: bacilieri r. PLoS One. 2018 Feb 8;13(2):e0192540. doi: 10.1371/journal.pone.0192540. eCollection 2018. PLoS One. 2018. PMID: 29420602 Free PMC article.
Genetic diversity, linkage disequilibrium and power of a large grapevine (Vitis vinifera L) diversity panel newly designed for association studies.
Nicolas SD, Péros JP, Lacombe T, Launay A, Le Paslier MC, Bérard A, Mangin B, Valière S, Martins F, Le Cunff L, Laucou V, Bacilieri R, Dereeper A, Chatelet P, This P, Doligez A. Nicolas SD, et al. Among authors: bacilieri r. BMC Plant Biol. 2016 Mar 22;16:74. doi: 10.1186/s12870-016-0754-z. BMC Plant Biol. 2016. PMID: 27005772 Free PMC article.
Pip shape echoes grapevine domestication history.
Bonhomme V, Ivorra S, Lacombe T, Evin A, Figueiral I, Maghradze D, Marchal C, Pagnoux C, Pastor T, Pomarèdes H, Bacilieri R, Terral JF, Bouby L. Bonhomme V, et al. Among authors: bacilieri r. Sci Rep. 2021 Nov 1;11(1):21381. doi: 10.1038/s41598-021-00877-4. Sci Rep. 2021. PMID: 34725430 Free PMC article.
Patterns of sequence polymorphism in the fleshless berry locus in cultivated and wild Vitis vinifera accessions.
Houel C, Bounon R, Chaïb J, Guichard C, Péros JP, Bacilieri R, Dereeper A, Canaguier A, Lacombe T, N'Diaye A, Le Paslier MC, Vernerey MS, Coriton O, Brunel D, This P, Torregrosa L, Adam-Blondon AF. Houel C, et al. Among authors: bacilieri r. BMC Plant Biol. 2010 Dec 22;10:284. doi: 10.1186/1471-2229-10-284. BMC Plant Biol. 2010. PMID: 21176183 Free PMC article.
24 results