Auvinen P - Search Results

1

Genomic characterization of the most barotolerant Listeria monocytogenes RO15 strain compared to reference strains used to evaluate food high pressure processing.

Duru IC, Andreevskaya M, Laine P, Rode TM, Ylinen A, Løvdal T, Bar N, Crauwels P, Riedel CU, Bucur FI, Nicolau AI, Auvinen P. Duru IC, et al. Among authors: auvinen p. BMC Genomics. 2020 Jul 2;21(1):455. doi: 10.1186/s12864-020-06819-0. BMC Genomics. 2020. PMID: 32615922 Free PMC article.

2

Comparison of microbial communities in marinated and unmarinated broiler meat by metagenomics.

Nieminen TT, Koskinen K, Laine P, Hultman J, Säde E, Paulin L, Paloranta A, Johansson P, Björkroth J, Auvinen P. Nieminen TT, et al. Among authors: auvinen p. Int J Food Microbiol. 2012 Jul 2;157(2):142-9. doi: 10.1016/j.ijfoodmicro.2012.04.016. Epub 2012 Apr 29. Int J Food Microbiol. 2012. PMID: 22626965

3

Genome sequence of Pectobacterium sp. strain SCC3193.

Koskinen JP, Laine P, Niemi O, Nykyri J, Harjunpää H, Auvinen P, Paulin L, Pirhonen M, Palva T, Holm L. Koskinen JP, et al. Among authors: auvinen p. J Bacteriol. 2012 Nov;194(21):6004. doi: 10.1128/JB.00681-12. J Bacteriol. 2012. PMID: 23045508 Free PMC article.

4

High-sequence diversity and structural conservation in the human T-cell receptor β junctional region during thymic development.

Tuulasvaara A, Baussand J, Laine P, Paulin L, Salminen J, Auvinen P, Gorochov G, Arstila TP. Tuulasvaara A, et al. Among authors: auvinen p. Eur J Immunol. 2013 Aug;43(8):2185-93. doi: 10.1002/eji.201343360. Epub 2013 Jun 12. Eur J Immunol. 2013. PMID: 23670527 Free article.

5

Taxonomically and functionally diverse microbial communities in deep crystalline rocks of the Fennoscandian shield.

Nyyssönen M, Hultman J, Ahonen L, Kukkonen I, Paulin L, Laine P, Itävaara M, Auvinen P. Nyyssönen M, et al. Among authors: auvinen p. ISME J. 2014 Jan;8(1):126-38. doi: 10.1038/ismej.2013.125. Epub 2013 Aug 15. ISME J. 2014. PMID: 23949662 Free PMC article.

6

Comparative proteome profiling of bovine and human Staphylococcus epidermidis strains for screening specifically expressed virulence and adaptation proteins.

Siljamäki P, Varmanen P, Kankainen M, Pyörälä S, Karonen T, Iivanainen A, Auvinen P, Paulin L, Laine PK, Taponen S, Simojoki H, Sukura A, Nyman TA, Savijoki K. Siljamäki P, et al. Among authors: auvinen p. Proteomics. 2014 Aug;14(16):1890-4. doi: 10.1002/pmic.201300275. Epub 2014 Jul 10. Proteomics. 2014. PMID: 24909406

7

Comparative genomics of Lactobacillus crispatus suggests novel mechanisms for the competitive exclusion of Gardnerella vaginalis.

Ojala T, Kankainen M, Castro J, Cerca N, Edelman S, Westerlund-Wikström B, Paulin L, Holm L, Auvinen P. Ojala T, et al. Among authors: auvinen p. BMC Genomics. 2014 Dec 5;15:1070. doi: 10.1186/1471-2164-15-1070. BMC Genomics. 2014. PMID: 25480015 Free PMC article.

8

Genome Sequence and Transcriptome Analysis of Meat-Spoilage-Associated Lactic Acid Bacterium Lactococcus piscium MKFS47.

Andreevskaya M, Johansson P, Laine P, Smolander OP, Sonck M, Rahkila R, Jääskeläinen E, Paulin L, Auvinen P, Björkroth J. Andreevskaya M, et al. Among authors: auvinen p. Appl Environ Microbiol. 2015 Jun;81(11):3800-11. doi: 10.1128/AEM.00320-15. Epub 2015 Mar 27. Appl Environ Microbiol. 2015. PMID: 25819958 Free PMC article.

9

Complete genome sequence of Leuconostoc gelidum subsp. gasicomitatum KG16-1, isolated from vacuum-packaged vegetable sausages.

Andreevskaya M, Hultman J, Johansson P, Laine P, Paulin L, Auvinen P, Björkroth J. Andreevskaya M, et al. Among authors: auvinen p. Stand Genomic Sci. 2016 Jun 7;11:40. doi: 10.1186/s40793-016-0164-8. eCollection 2016. Stand Genomic Sci. 2016. PMID: 27274361 Free PMC article.

10

Lactobacillus oligofermentans glucose, ribose and xylose transcriptomes show higher similarity between glucose and xylose catabolism-induced responses in the early exponential growth phase.

Andreevskaya M, Johansson P, Jääskeläinen E, Rämö T, Ritari J, Paulin L, Björkroth J, Auvinen P. Andreevskaya M, et al. Among authors: auvinen p. BMC Genomics. 2016 Aug 3;17:539. doi: 10.1186/s12864-016-2840-x. BMC Genomics. 2016. PMID: 27487841 Free PMC article.

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