Afonnikov DA - Search Results

1

Orthoscape: a cytoscape application for grouping and visualization KEGG based gene networks by taxonomy and homology principles.

Mustafin ZS, Lashin SA, Matushkin YG, Gunbin KV, Afonnikov DA. Mustafin ZS, et al. Among authors: afonnikov da. BMC Bioinformatics. 2017 Jan 27;18(Suppl 1):1427. doi: 10.1186/s12859-016-1427-5. BMC Bioinformatics. 2017. PMID: 28466792 Free PMC article.

2

Detection of conserved physico-chemical characteristics of proteins by analyzing clusters of positions with co-ordinated substitutions.

Afonnikov DA, Oshchepkov DY, Kolchanov NA. Afonnikov DA, et al. Bioinformatics. 2001 Nov;17(11):1035-46. doi: 10.1093/bioinformatics/17.11.1035. Bioinformatics. 2001. PMID: 11724732

3

Adaptive evolution of genes of archaea belonging to the genus Pyrococcus associated with adaptation to life under high-pressure conditions.

Gunbin KV, Afonnikov DA, Boldyreva EV, Kolchanov NA. Gunbin KV, et al. Among authors: afonnikov da. Dokl Biochem Biophys. 2009 Mar-Apr;425:91-3. doi: 10.1134/s1607672909020094. Dokl Biochem Biophys. 2009. PMID: 19496330 No abstract available.

4

Molecular evolution of the hyperthermophilic archaea of the Pyrococcus genus: analysis of adaptation to different environmental conditions.

Gunbin KV, Afonnikov DA, Kolchanov NA. Gunbin KV, et al. Among authors: afonnikov da. BMC Genomics. 2009 Dec 30;10:639. doi: 10.1186/1471-2164-10-639. BMC Genomics. 2009. PMID: 20042074 Free PMC article.

5

Important role of hydrophobic interactions in high-pressure adaptation of proteins.

Afonnikov DA, Medvedev KE, Gunbin KV, Kolchanov NA. Afonnikov DA, et al. Dokl Biochem Biophys. 2011 May-Jun;438:113-6. doi: 10.1134/S160767291103001X. Epub 2011 Jul 3. Dokl Biochem Biophys. 2011. PMID: 21725885 No abstract available.

6

Molecular evolution of cyclin proteins in animals and fungi.

Gunbin KV, Suslov VV, Turnaev II, Afonnikov DA, Kolchanov NA. Gunbin KV, et al. Among authors: afonnikov da. BMC Evol Biol. 2011 Jul 28;11:224. doi: 10.1186/1471-2148-11-224. BMC Evol Biol. 2011. PMID: 21798004 Free PMC article.

7

Computer System for Analysis of Molecular Evolution Modes (SAMEM): analysis of molecular evolution modes at deep inner branches of the phylogenetic tree.

Gunbin KV, Suslov VV, Genaev MA, Afonnikov DA. Gunbin KV, et al. Among authors: afonnikov da. In Silico Biol. 2011-2012;11(3-4):109-23. doi: 10.3233/ISB-2012-0446. In Silico Biol. 2011. PMID: 22935965

8

Plant auxin biosynthesis did not originate in charophytes.

Turnaev II, Gunbin KV, Afonnikov DA. Turnaev II, et al. Among authors: afonnikov da. Trends Plant Sci. 2015 Aug;20(8):463-5. doi: 10.1016/j.tplants.2015.06.004. Epub 2015 Jul 15. Trends Plant Sci. 2015. PMID: 26186977 No abstract available.

9

The evolution of Homo sapiens denisova and Homo sapiens neanderthalensis miRNA targeting genes in the prenatal and postnatal brain.

Gunbin KV, Afonnikov DA, Kolchanov NA, Derevianko AP, Rogaev EI. Gunbin KV, et al. Among authors: afonnikov da. BMC Genomics. 2015;16 Suppl 13(Suppl 13):S4. doi: 10.1186/1471-2164-16-S13-S4. Epub 2015 Dec 16. BMC Genomics. 2015. PMID: 26693966 Free PMC article.

10

A compendium of human genes regulating feeding behavior and body weight, its functional characterization and identification of GWAS genes involved in brain-specific PPI network.

Ignatieva EV, Afonnikov DA, Saik OV, Rogaev EI, Kolchanov NA. Ignatieva EV, et al. Among authors: afonnikov da. BMC Genet. 2016 Dec 22;17(Suppl 3):158. doi: 10.1186/s12863-016-0466-2. BMC Genet. 2016. PMID: 28105929 Free PMC article.

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