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PDBx/mmCIF Ecosystem: Foundational Semantic Tools for Structural Biology.
Westbrook JD, Young JY, Shao C, Feng Z, Guranovic V, Lawson CL, Vallat B, Adams PD, Berrisford JM, Bricogne G, Diederichs K, Joosten RP, Keller P, Moriarty NW, Sobolev OV, Velankar S, Vonrhein C, Waterman DG, Kurisu G, Berman HM, Burley SK, Peisach E. Westbrook JD, et al. Among authors: adams pd. J Mol Biol. 2022 Jun 15;434(11):167599. doi: 10.1016/j.jmb.2022.167599. Epub 2022 Apr 20. J Mol Biol. 2022. PMID: 35460671 Free PMC article. Review.
PHENIX: building new software for automated crystallographic structure determination.
Adams PD, Grosse-Kunstleve RW, Hung LW, Ioerger TR, McCoy AJ, Moriarty NW, Read RJ, Sacchettini JC, Sauter NK, Terwilliger TC. Adams PD, et al. Acta Crystallogr D Biol Crystallogr. 2002 Nov;58(Pt 11):1948-54. doi: 10.1107/s0907444902016657. Epub 2002 Oct 21. Acta Crystallogr D Biol Crystallogr. 2002. PMID: 12393927
Automated ligand fitting by core-fragment fitting and extension into density.
Terwilliger TC, Klei H, Adams PD, Moriarty NW, Cohn JD. Terwilliger TC, et al. Among authors: adams pd. Acta Crystallogr D Biol Crystallogr. 2006 Aug;62(Pt 8):915-22. doi: 10.1107/S0907444906017161. Epub 2006 Jul 18. Acta Crystallogr D Biol Crystallogr. 2006. PMID: 16855309 Free PMC article.
Ligand identification using electron-density map correlations.
Terwilliger TC, Adams PD, Moriarty NW, Cohn JD. Terwilliger TC, et al. Among authors: adams pd. Acta Crystallogr D Biol Crystallogr. 2007 Jan;63(Pt 1):101-7. doi: 10.1107/S0907444906046233. Epub 2006 Dec 13. Acta Crystallogr D Biol Crystallogr. 2007. PMID: 17164532 Free PMC article.
Interpretation of ensembles created by multiple iterative rebuilding of macromolecular models.
Terwilliger TC, Grosse-Kunstleve RW, Afonine PV, Adams PD, Moriarty NW, Zwart P, Read RJ, Turk D, Hung LW. Terwilliger TC, et al. Among authors: adams pd. Acta Crystallogr D Biol Crystallogr. 2007 May;63(Pt 5):597-610. doi: 10.1107/S0907444907009791. Epub 2007 Apr 21. Acta Crystallogr D Biol Crystallogr. 2007. PMID: 17452785 Free PMC article.
489 results